RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 PDGFBP01127 241 aaPredicted RBP4.36□□□□□ -1.71
HDAC2-216ENST00000523628 ELFN1P0C7U0 828 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 RALAP11233 206 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 GNSP15586 552 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 PECAM1P16284 738 aaPredicted RBP4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CCNE1P24864 410 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 YWHAQP27348 245 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 PCSK6P29122 969 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CD6P30203 668 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 NMT1P30419 496 aaKnown RBP4.36□□□□□ -1.71
HDAC2-216ENST00000523628 OXTRP30559 389 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CXCR5P32302 372 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 NUDT1P36639 197 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 TNFSF9P41273 254 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 HALP42357 657 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 COPAP53621 1224 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 NUCB2P80303 420 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 SHC2P98077 582 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CYP24A1Q07973 514 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CCDC15Q0P6D6 951 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 BIRC3Q13489 604 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 STARD3Q14849 445 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 ZNF77Q15935 545 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 IL17AQ16552 155 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 HECTD3Q5T447 861 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 ABHD17BQ5VST6 288 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 RESP18Q5W5W9 173 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 WSCD1Q658N2 575 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 VWA1Q6PCB0 445 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 IL27RAQ6UWB1 636 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CRELD2Q6UXH1 353 aaPredicted RBP4.36□□□□□ -1.71
HDAC2-216ENST00000523628 LPCAT2Q7L5N7 544 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 TRAPPC11Q7Z392 1133 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CCDC28AQ8IWP9 274 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 SCML4Q8N228 414 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 GUF1Q8N442 669 aaKnown RBP4.36□□□□□ -1.71
HDAC2-216ENST00000523628 ATAD1Q8NBU5 361 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 SIMC1Q8NDZ2 872 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 TSTD1Q8NFU3 115 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 ING5Q8WYH8 240 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 ATG4AQ8WYN0 398 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 SNX19Q92543 992 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 EPSTI1Q96J88 318 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 B3GALT6Q96L58 329 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CNOT6LQ96LI5 555 aaKnown RBP4.36□□□□□ -1.71
HDAC2-216ENST00000523628 NUSAP1Q9BXS6 441 aaKnown RBP4.36□□□□□ -1.71
HDAC2-216ENST00000523628 SLC2A11Q9BYW1 496 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 MIS12Q9H081 205 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 PCDHAC1Q9H158 963 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 ECT2Q9H8V3 914 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CSNK1G1Q9HCP0 422 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 ARFGAP3Q9NP61 516 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 AGPAT3Q9NRZ7 376 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 HCFC1R1Q9NWW0 138 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 CLIC5Q9NZA1 410 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 MMP17Q9ULZ9 603 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 NDRG2Q9UN36 371 aaKnown RBP4.36□□□□□ -1.71
HDAC2-216ENST00000523628 SHOC2Q9UQ13 582 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 MTMR6Q9Y217 621 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 PAXBP1Q9Y5B6 917 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 GREB1Q4ZG55 1949 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 PLXND1Q9Y4D7 1925 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 NOTCH4Q99466 2003 aa4.36□□□□□ -1.71
HDAC2-216ENST00000523628 OBSL1O75147 1896 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 PTPRDP23468 1912 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 FAM237AA0A1B0GTK4 181 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 CXorf51AA0A1B0GTR3 108 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 BICDL2A1A5D9 508 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 E9PAM4 449 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 F8W810 466 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 I3L4J1 428 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 PSMA7O14818 248 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 CETN3O15182 167 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 YKT6O15498 198 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 POLR2DO15514 142 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 ADAM12O43184 909 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 PI15O43692 258 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 SRGAP2O75044 1071 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 CBFA2T3O75081 653 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 MOSPD3O75425 235 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 OAS1P00973 400 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 EDN1P05305 212 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 FAM200BP0CF97 657 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 DLATP10515 647 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 EPB41P11171 864 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 TDGF1P13385 188 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 CEACAM1P13688 526 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 HMGA1P17096 107 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 ATF6P18850 670 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 ITGALP20701 1170 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 CSRP1P21291 193 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 MST1P26927 711 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 PPIFP30405 207 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 ADSSP30520 456 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 HTR7P34969 479 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 PSMC2P35998 433 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 ATP5C1P36542 298 aaKnown RBP4.35□□□□□ -1.71
HDAC2-216ENST00000523628 LIPAP38571 399 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 SYKP43405 635 aa4.35□□□□□ -1.71
HDAC2-216ENST00000523628 PNLIPRP1P54315 467 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms