RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 RGSL1A5PLK6 1076 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 C21orf140B9A014 251 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 GRID2O43424 1007 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 VPS4BO75351 444 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 KIAA0754O94854 1291 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 SORBS2O94875 1100 aaKnown RBP12.13□□□□□ -0.47
BRF2-204ENST00000522539 UBXN7O94888 489 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 AGFG2O95081 481 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 NDUFA10O95299 355 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 CLDN7O95471 211 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 RNF224P0DH78 156 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 GZMAP12544 262 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 CES1P23141 567 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 SERPINB6P35237 376 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 GARSP41250 739 aaKnown RBP12.13□□□□□ -0.47
BRF2-204ENST00000522539 MAPK9P45984 424 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 NOP2P46087 812 aaKnown RBP12.13□□□□□ -0.47
BRF2-204ENST00000522539 SPINT3P49223 89 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 FOXM1Q08050 763 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 FILIP1LQ4L180 1135 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
BRF2-204ENST00000522539 ARRDC2Q8TBH0 407 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 CPT1CQ8TCG5 803 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 SSC4DQ8WTU2 575 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 FATE1Q969F0 183 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 STAMBPL1Q96FJ0 436 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 OR6C1Q96RD1 312 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 TRIM55Q9BYV6 548 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 POLR1EQ9GZS1 481 aaKnown RBP12.13□□□□□ -0.47
BRF2-204ENST00000522539 EPHA6Q9UF33 1036 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 AMACRQ9UHK6 382 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 VPS4AQ9UN37 437 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 MAP4K5Q9Y4K4 846 aa12.13□□□□□ -0.47
BRF2-204ENST00000522539 PCDHGA9Q9Y5G4 932 aaKnown RBP12.13□□□□□ -0.47
BRF2-204ENST00000522539 DOPEY1Q5JWR5 2465 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 CDC14CA4D256 554 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 TTLL8A6PVC2 850 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 TMCO5BA8MYB1 307 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 GPR89AB7ZAQ6 455 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 CHUKO15111 745 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 SNX2O60749 519 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 SPAG6O75602 509 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 DNAJB5O75953 348 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 MT-ND3P03897 115 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 GPR89BP0CG08 455 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 RARAP10276 462 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 ZNF8P17098 575 aaPredicted RBP12.12□□□□□ -0.47
BRF2-204ENST00000522539 IL4RP24394 825 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 SLC19A1P41440 591 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 CAPZBP47756 277 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 LEPRP48357 1165 aaKnown RBP12.12□□□□□ -0.47
BRF2-204ENST00000522539 UBXN1Q04323 297 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 DNASE1L3Q13609 305 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 SMTNL2Q2TAL5 461 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 PHYKPLQ8IUZ5 450 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 FAM71BQ8TC56 605 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 TEKT4Q8WW24 435 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
BRF2-204ENST00000522539 TWSG1Q9GZX9 223 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 RAB33BQ9H082 229 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 BRD8Q9H0E9 1235 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 FAM83DQ9H4H8 585 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 PCDH18Q9HCL0 1135 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 LHX9Q9NQ69 397 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.12□□□□□ -0.47
BRF2-204ENST00000522539 ZNF624Q9P2J8 865 aaPredicted RBP12.12□□□□□ -0.47
BRF2-204ENST00000522539 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 ATXN10Q9UBB4 475 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 PADI1Q9ULC6 663 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 CHKBQ9Y259 395 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 SCINQ9Y6U3 715 aa12.12□□□□□ -0.47
BRF2-204ENST00000522539 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 ESPNB1AK53 854 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 SEMA7AO75326 666 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 KATNA1O75449 491 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 FTLP02792 175 aaPredicted RBP12.11□□□□□ -0.47
BRF2-204ENST00000522539 NELFEP18615 380 aaKnown RBP12.11□□□□□ -0.47
BRF2-204ENST00000522539 EPHB1P54762 984 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 GSDMDP57764 484 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 DSC2Q02487 901 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 SLC25A11Q02978 314 aaKnown RBP12.11□□□□□ -0.47
BRF2-204ENST00000522539 GALNT2Q10471 571 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 UGT8Q16880 541 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 TXNRD3NBQ6F5E7 133 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 ABRAXAS1Q6UWZ7 409 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 RASGRP3Q8IV61 690 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 CT55Q8WUE5 264 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 RSC1A1Q92681 617 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 EID2BQ96D98 161 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 TGM7Q96PF1 710 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 FCRL4Q96PJ5 515 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 KLC4Q9NSK0 619 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 POT1Q9NUX5 634 aa12.11□□□□□ -0.47
BRF2-204ENST00000522539 RCOR3Q9P2K3 495 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms