RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 NCSTNQ92542 709 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 ART4Q93070 314 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 DDA1Q9BW61 102 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 ASPSCR1Q9BZE9 553 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 OSGEPL1Q9H4B0 414 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 KLC4Q9NSK0 619 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 SLC39A1Q9NY26 324 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 TMEM9Q9P0T7 183 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 PDP2Q9P2J9 529 aa18.24■□□□□ 0.51
TOP1MT-216ENST00000522121 KALRNO60229 2985 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 A6NCN8 305 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 KMOO15229 486 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 VEGFDO43915 354 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 PECAM1P16284 738 aaPredicted RBP18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 BPIP17213 487 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 ATP1A2P50993 1020 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 RAB15P59190 212 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 LLGL1Q15334 1064 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 INSCQ1MX18 579 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 SNAP47Q5SQN1 464 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 ZNF648Q5T619 568 aaPredicted RBP18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 CRTC3Q6UUV7 619 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 VASH2Q86V25 355 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 LRRTM4Q86VH4 590 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 ZC3H18Q86VM9 953 aaKnown RBP18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 MED8Q96G25 268 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 RBM41Q96IZ5 413 aaKnown RBP18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 PLEKHG4BQ96PX9 1271 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 VAT1Q99536 393 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 EPB41L1Q9H4G0 881 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 TRABDQ9H4I3 376 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 PRDM8Q9NQV8 689 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 KLHL8Q9P2G9 620 aaPredicted RBP18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 CPNE7Q9UBL6 633 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 PCDHA13Q9Y5I0 950 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 ADGRG1Q9Y653 693 aa18.23■□□□□ 0.51
TOP1MT-216ENST00000522121 hCG_1818297A0A087WSY0 165 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 EFCAB7A8K855 629 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 B4E171 279 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 CHUKO15111 745 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 LCA5LO95447 670 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 EPOP01588 193 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 ZNF7P17097 686 aaPredicted RBP18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 NFKB1P19838 968 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 CYLC1P35663 651 aaPredicted RBP18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 HMGCLP35914 325 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 TSPAN7P41732 249 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 MAPK9P45984 424 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 WNT3AP56704 352 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 WASHC5Q12768 1159 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 SRSF6Q13247 344 aaKnown RBP18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 DCAF12Q5T6F0 453 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 ZDHHC20Q5W0Z9 365 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 PID1Q7Z2X4 250 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 VPS35Q96QK1 796 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 ARHGAP9Q9BRR9 750 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 GOLPH3Q9H4A6 298 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 BPIFA1Q9NP55 256 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 SPO11Q9Y5K1 396 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 SCN8AQ9UQD0 1980 aa18.22■□□□□ 0.51
TOP1MT-216ENST00000522121 LOC285095A0A1B0GVY8 99 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 A8MU76 341 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 HACD1B0YJ81 288 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 AURKAO14965 403 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 CDK14O94921 469 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 ITGB2P05107 769 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 CD68P34810 354 aaPredicted RBP18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 PLA2G4EQ3MJ16 856 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 C11orf63Q6NUN7 778 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 KDELC1Q6UW63 502 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 XKR5Q6UX68 686 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 DAAM2Q86T65 1068 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 TRIM48Q8IWZ4 208 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 GDAP1Q8TB36 358 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 HTR3CQ8WXA8 447 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 JPH3Q8WXH2 748 aaPredicted RBP18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 HAUS1Q96CS2 278 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 TTC25Q96NG3 672 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 TEFMQ96QE5 360 aaKnown RBP18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 FCRL5Q96RD9 977 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 FERMT1Q9BQL6 677 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 TIMM29Q9BSF4 260 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 SEMA4CQ9C0C4 833 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 OCIAD1Q9NX40 245 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 HACD3Q9P035 362 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 TRHDEQ9UKU6 1024 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 PCDHGA4Q9Y5G9 962 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 B3GALT1Q9Y5Z6 326 aa18.21■□□□□ 0.51
TOP1MT-216ENST00000522121 LILRA5A6NI73 299 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 PDZK1P1A8MUH7 402 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 MTX2O75431 263 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 VIPP01282 170 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 VCLP18206 1134 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 XRCC1P18887 633 aaPredicted RBP18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 ADCY2Q08462 1091 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 MPP3Q13368 585 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 GTF2H3Q13889 308 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 SIRPB2Q5JXA9 342 aa18.2■□□□□ 0.5
TOP1MT-216ENST00000522121 CCDC181Q5TID7 509 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms