RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 CFAP58Q5T655 872 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 PAPD4Q6PIY7 484 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 GFRALQ6UXV0 394 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 ADIPOR2Q86V24 386 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 TMEM219Q86XT9 240 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 IQCF1Q8N6M8 205 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 RBMXL3Q8N7X1 1067 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 ZNF441Q8N8Z8 693 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 LILRB1Q8NHL6 650 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 ELP5Q8TE02 316 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 FEM1CQ96JP0 617 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 NCAPGQ9BPX3 1015 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 SLF1Q9BQI6 1058 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 RAB6CQ9H0N0 254 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 CHORDC1Q9UHD1 332 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 KLHL20Q9Y2M5 609 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 LOXL2Q9Y4K0 774 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 MAGED1Q9Y5V3 778 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 GAPVD1Q14C86 1478 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 MROH2BQ7Z745 1585 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 ATAD2BQ9ULI0 1458 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 EIF4E1BA6NMX2 242 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 TIMM44O43615 452 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 RSL1D1O76021 490 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 DNTTP04053 509 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 HIST1H2ABP04908 130 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 HIST1H2ADP20671 130 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 KRT20P35900 424 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 NNMTP40261 264 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 PPP5CP53041 499 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 DSCR9P59020 149 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 DSC1Q08554 894 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 KCNC3Q14003 757 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 SYT16Q17RD7 645 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 EFHC1Q5JVL4 640 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 GARNL3Q5VVW2 1013 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 Q75L30 129 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 HIST3H2AQ7L7L0 130 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 CCDC190Q86UF4 302 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 SAMD14Q8IZD0 417 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 SLC38A9Q8NBW4 561 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 SLC38A5Q8WUX1 472 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 GCNAQ96QF7 691 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 DDOQ99489 341 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 WACQ9BTA9 647 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 KLHL4Q9C0H6 718 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 DNAJC18Q9H819 358 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 PCDH9Q9HC56 1237 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 NKIRAS2Q9NYR9 191 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 DNAJB4Q9UDY4 337 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 POLG2Q9UHN1 485 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 EXO1Q9UQ84 846 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 OR2W1Q9Y3N9 320 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 TMEM184BQ9Y519 407 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 KIF13AQ9H1H9 1805 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 PASKQ96RG2 1323 aa4.46□□□□□ -1.7
CTNNA1-222ENST00000520400 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 KANSL1LA0AUZ9 987 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 SYNDIG1LA6NDD5 238 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 C4orf47A7E2U8 309 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 TMEM189-UBE2V1I3L0A0 370 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 KCNN4O15554 427 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 LDB3O75112 727 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 GAGE7O76087 117 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 GAGE12FP0CL80 117 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 GAGE12GP0CL81 117 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 GAGE12IP0CL82 117 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 FCGR1AP12314 374 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 NMBRP28336 390 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 FASLGP48023 281 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 POLGP54098 1239 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 TUBA1BP68363 451 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 TMF1P82094 1093 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 COG7P83436 770 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 RELQ04864 619 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 EGR4Q05215 589 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 GAGE1Q13065 139 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 GAGE4Q13068 117 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 MAD2L1Q13257 205 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 UBE2V1Q13404 147 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 SF3B4Q15427 424 aaKnown RBP eCLIP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 CCDC96Q2M329 555 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 IGSF11Q5DX21 431 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 RPUSD3Q6P087 351 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 TEX38Q6PEX7 206 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 PRSS57Q6UWY2 283 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 ZNF534Q76KX8 674 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 PLPPR4Q7Z2D5 763 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 ADGRA1Q86SQ6 560 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 TMPRSS12Q86WS5 348 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 GALNT13Q8IUC8 556 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 SPATA2LQ8IUW3 424 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 BBS10Q8TAM1 723 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 GSDMBQ8TAX9 411 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 PTPMT1Q8WUK0 201 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 NTPCRQ9BSD7 190 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 HGH1Q9BTY7 390 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 MMTAG2Q9BU76 263 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 SEZ6LQ9BYH1 1024 aa4.45□□□□□ -1.7
CTNNA1-222ENST00000520400 TMEM30AQ9NV96 361 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms