RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ATE1O95260 518 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 EPHX2P34913 555 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 NDUFV1P49821 464 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SEPHS1P49903 392 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 GABARAPL2P60520 117 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 RPL38P63173 70 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 CSNK2BP67870 215 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 OLR1P78380 273 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SLC36A3Q495N2 470 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF678Q5SXM1 525 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 LBX2Q6XYB7 198 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 RNF19BQ6ZMZ0 732 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 GLT6D1Q7Z4J2 308 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 STK40Q8N2I9 435 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PARP8Q8N3A8 854 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 GPRC5AQ8NFJ5 357 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SHKBP1Q8TBC3 707 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 CHPT1Q8WUD6 406 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 FCGR1BQ92637 280 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 FCRL2Q96LA5 508 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PCYT2Q99447 389 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 LPIN3Q9BQK8 851 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ROGDIQ9GZN7 287 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ELOVL6Q9H5J4 265 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SCUBE2Q9NQ36 999 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 KRT84Q9NSB2 600 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 RNF19AQ9NV58 838 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PNMA8BQ9ULN7 279 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 POLR3HQ9Y535 204 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SOWAHBA6NEL2 793 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF195O14628 629 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 DCLK1O15075 740 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PAGE1O75459 146 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 CYP3A5P20815 502 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 BDNFP23560 247 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ELK4P28324 431 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 TTPAP49638 278 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ARPC4P59998 168 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PTPRNQ16849 979 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PLEKHG6Q3KR16 790 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 C10orf120Q5SQS8 335 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 RBM20Q5T481 1227 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SLC22A16Q86VW1 577 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 IPCEF1Q8WWN9 437 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 BCL7BQ9BQE9 202 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 MFSD1Q9H3U5 465 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 AGPAT4Q9NRZ5 378 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 UXTQ9UBK9 157 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 OPTCQ9UBM4 332 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 IKZF3Q9UKT9 509 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PEX16Q9Y5Y5 336 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 MYH14Q7Z406 1995 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 LINC00854A0A1B0GVQ3 168 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 F5H5T6 163 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 M0QX08 132 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF197O14709 1029 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PDE9AO76083 593 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PGK1P00558 417 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 HTR1EP28566 365 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 BNC1Q01954 994 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ELP6Q0PNE2 266 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 MTA1Q13330 715 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 TSTA3Q13630 321 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SIM2Q14190 667 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ZFP69Q49AA0 526 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 RABL3Q5HYI8 236 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 IRAK1BP1Q5VVH5 260 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF544Q6NX49 715 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ADAMTSL2Q86TH1 951 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 UTP15Q8TED0 518 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ZBED2Q9BTP6 218 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 TEX12Q9BXU0 123 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ZYG11BQ9C0D3 744 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 RSPH9Q9H1X1 276 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 TOR3AQ9H497 397 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 NXF3Q9H4D5 531 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 GIT1Q9Y2X7 761 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 SAMHD1Q9Y3Z3 626 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ST14Q9Y5Y6 855 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 NME4O00746 187 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 AIREO43918 545 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 NOBOXO60393 691 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ULK1O75385 1050 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 IFNA14P01570 189 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 CYP11A1P05108 521 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ENO2P09104 434 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 CYP4B1P13584 511 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 IL7RP16871 459 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 OGNP20774 298 aaKnown RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 MAXP61244 160 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 TWF1Q12792 350 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 EFEMP1Q12805 493 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 PWP1Q13610 501 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 AP5B1Q2VPB7 878 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 C6orf141Q5SZD1 244 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 CHST15Q7LFX5 561 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 LDB1Q86U70 411 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-203ENST00000517490 ANKRD13BQ86YJ7 626 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms