RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 HPSEQ9Y251 543 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 PCDHGC4Q9Y5F7 938 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 A8MUI8 341 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 MEIS2O14770 477 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 PGRMC2O15173 223 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 TLX3O43711 291 aaPredicted RBP10.95□□□□□ -0.66
TRIM41-209ENST00000515834 CLEC3AO75596 197 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 PRAMEF1O95521 474 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 POP4O95707 220 aaKnown RBP10.95□□□□□ -0.66
TRIM41-209ENST00000515834 PBX3P40426 434 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 RGS8P57771 180 aaPredicted RBP10.95□□□□□ -0.66
TRIM41-209ENST00000515834 TSHZ1Q6ZSZ6 1077 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 ZSCAN1Q8NBB4 408 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 FAM110BQ8TC76 370 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 SPAG4Q9NPE6 437 aa10.95□□□□□ -0.66
TRIM41-209ENST00000515834 RGSL1A5PLK6 1076 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SLC38A8A6NNN8 435 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 E7ENQ6 273 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 PEX12O00623 359 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 KPNA4O00629 521 aaPredicted RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 NOS1APO75052 506 aaPredicted RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SLC7A1P30825 629 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SCNN1AP37088 669 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 CACNA2D1P54289 1103 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 DSC2Q02487 901 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 FSTL1Q12841 308 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 INTS6LQ5JSJ4 861 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 LIPMQ5VYY2 423 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 C10orf107Q8IVU9 208 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 EFHD2Q96C19 240 aaPredicted RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 FAM192AQ9GZU8 254 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 MRPS30Q9NP92 439 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 NDUFA13Q9P0J0 144 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SSR3Q9UNL2 185 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SNX10Q9Y5X0 201 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SNUPNO95149 360 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 ITGA2BP08514 1039 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 CACNG1Q06432 222 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 CHAF1BQ13112 559 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SLC34A3Q8N130 599 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SGCDQ92629 289 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SNX15Q9NRS6 342 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 AXIN1O15169 862 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 ALG1LQ6GMV1 187 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 DUSP9Q99956 384 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 CARS2Q9HA77 564 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 GLOD4Q9HC38 313 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 CACNG4Q9UBN1 327 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 TRAFD1O14545 582 aaPredicted RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 EPHA3P29320 983 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 PLA2G16P53816 162 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 PER3P56645 1201 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 PSME3P61289 254 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SLC34A1Q06495 639 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 PUDPQ08623 228 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 MADCAM1Q13477 382 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 MAPK14Q16539 360 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 MED27Q6P2C8 311 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SLC25A36Q96CQ1 311 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 DHRS7Q9Y394 339 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 CCDC182A6NF36 153 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 VSTM5A8MXK1 200 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 AREL1O15033 823 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 TNFP01375 233 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 ZNF823P16415 610 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 PRKCHP24723 683 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SP140Q13342 867 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 KCTD21Q4G0X4 260 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 UBE2J2Q8N2K1 259 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SRFBP1Q8NEF9 429 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 LMX1AQ8TE12 382 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 CYB5D2Q8WUJ1 264 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 SNX33Q8WV41 574 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 HMCESQ96FZ2 354 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 P2RY11Q96G91 374 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 KAZALD1Q96I82 304 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 COX4I1P13073 169 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 RAB2AP61019 212 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 KCTD19Q17RG1 926 aaPredicted RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 RNASEH2BQ5TBB1 312 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 METTL21CQ5VZV1 264 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 TCAIMQ8N3R3 496 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 FAM46DQ8NEK8 389 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 OR2L3Q8NG85 312 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 TRMT61BQ9BVS5 477 aaKnown RBP10.94□□□□□ -0.66
TRIM41-209ENST00000515834 CDH19Q9H159 772 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 ADGRE2Q9UHX3 823 aa10.94□□□□□ -0.66
TRIM41-209ENST00000515834 PRMT5O14744 637 aaPredicted RBP10.93□□□□□ -0.66
TRIM41-209ENST00000515834 SLC22A3O75751 556 aa10.93□□□□□ -0.66
TRIM41-209ENST00000515834 CYP1A2P05177 515 aa10.93□□□□□ -0.66
TRIM41-209ENST00000515834 ZBTB48P10074 688 aaPredicted RBP10.93□□□□□ -0.66
TRIM41-209ENST00000515834 CCL5P13501 91 aa10.93□□□□□ -0.66
TRIM41-209ENST00000515834 ACTR1BP42025 376 aa10.93□□□□□ -0.66
TRIM41-209ENST00000515834 RTP1P59025 263 aa10.93□□□□□ -0.66
TRIM41-209ENST00000515834 ACTR1AP61163 376 aa10.93□□□□□ -0.66
TRIM41-209ENST00000515834 SNAPC1Q16533 368 aa10.93□□□□□ -0.66
TRIM41-209ENST00000515834 SMARCD3Q6STE5 483 aa10.93□□□□□ -0.66
TRIM41-209ENST00000515834 AADATQ8N5Z0 425 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms