RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 DSG4Q86SJ6 1040 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 AACSQ86V21 672 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 DZIP1Q86YF9 867 aaKnown RBP4.09□□□□□ -1.75
MATR3-226ENST00000515833 HJURPQ8NCD3 748 aaPredicted RBP4.09□□□□□ -1.75
MATR3-226ENST00000515833 KIAA1524Q8TCG1 905 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
MATR3-226ENST00000515833 CLMNQ96JQ2 1002 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 TMEM68Q96MH6 324 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 CAMK1GQ96NX5 476 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 RUFY1Q96T51 708 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 FERMT1Q9BQL6 677 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 RHOXF2Q9BQY4 288 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 WACQ9BTA9 647 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 DENND2DQ9H6A0 471 aaPredicted RBP4.09□□□□□ -1.75
MATR3-226ENST00000515833 ATAD3AQ9NVI7 634 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 AATFQ9NY61 560 aaKnown RBP eCLIP4.09□□□□□ -1.75
MATR3-226ENST00000515833 FBXO40Q9UH90 709 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 ADAM21Q9UKJ8 722 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 TNFSF13BQ9Y275 285 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 PCDHGA5Q9Y5G8 931 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 PCDHGA1Q9Y5H4 931 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.09□□□□□ -1.75
MATR3-226ENST00000515833 SPATA31A5Q5VU36 1347 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 SPATA31A7Q8IWB4 1347 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 CNTNAP2Q9UHC6 1331 aa4.09□□□□□ -1.75
MATR3-226ENST00000515833 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 LOC102723996A0A087X1L8 192 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 A0A0G2JPF8 293 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CBY3A6NI87 242 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 HNRNPCL3B7ZW38 293 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 M0QX08 132 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SLC33A1O00400 549 aaPredicted RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 UTYO14607 1347 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SLC30A4O14863 429 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 ATP8B3O60423 1300 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 NTN1O95631 604 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 DDAH2O95865 285 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 EBLN1P0CF75 366 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 HNRNPCL4P0DMR1 293 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CYP2D6P10635 497 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 PDHBP11177 359 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 TOP1P11387 765 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 ITGAXP20702 1163 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 TNFRSF8P28908 595 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 MC5RP33032 325 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CCR10P46092 362 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 MTIF2P46199 727 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 RAB28P51157 221 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CCR3P51677 355 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CAPZA1P52907 286 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SOX10P56693 466 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CLDN2P57739 230 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CCNA1P78396 465 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 COG7P83436 770 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 GAMTQ14353 236 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 ZNF273Q14593 569 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 KPNB1Q14974 876 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 PLK5Q496M5 336 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SHEQ5VZ18 495 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 TPGS2Q68CL5 300 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 TMEM65Q6PI78 240 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 ZNF517Q6ZMY9 492 aaPredicted RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 C15orf39Q6ZRI6 1047 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 DCDC5Q6ZRR9 648 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SPATA19Q7Z5L4 167 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 BCDIN3DQ7Z5W3 292 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 RFX6Q8HWS3 928 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SYCP3Q8IZU3 236 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 FBXW8Q8N3Y1 598 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 ZCCHC9Q8N567 271 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 TC2NQ8N9U0 490 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SPATA3Q8NHX4 192 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 TMEM170AQ8WVE7 144 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 ANKRD49Q8WVL7 239 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SLC13A3Q8WWT9 602 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 LRRC59Q96AG4 307 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 TUBGCP3Q96CW5 907 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 HDAC11Q96DB2 347 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 GIMAP5Q96F15 307 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CNOT6LQ96LI5 555 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 NEK1Q96PY6 1258 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 FRG2BQ96QU4 278 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 GAL3ST4Q96RP7 486 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 SIN3AQ96ST3 1273 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 MGME1Q9BQP7 344 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 C1QTNF1Q9BXJ1 281 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 FRMD8Q9BZ67 464 aaPredicted RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 NUAK2Q9H093 628 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 ISCUQ9H1K1 167 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CD93Q9NPY3 652 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 TRPV5Q9NQA5 729 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 ARL8BQ9NVJ2 186 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 GAR1Q9NY12 217 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 HMG20BQ9P0W2 317 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CPSF3Q9UKF6 684 aaKnown RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 PLAGL1Q9UM63 463 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 CARD8Q9Y2G2 431 aa4.08□□□□□ -1.76
MATR3-226ENST00000515833 RPH3AQ9Y2J0 694 aaPredicted RBP4.08□□□□□ -1.76
MATR3-226ENST00000515833 R3HDM2Q9Y2K5 976 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms