RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 UHRF2Q96PU4 802 aa4.65□□□□□ -1.67
SMARCA5-203ENST00000515531 POLR3CQ9BUI4 534 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-203ENST00000515531 EIF2B3Q9NR50 452 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-203ENST00000515531 TCP11L1Q9NUJ3 509 aa4.65□□□□□ -1.67
SMARCA5-203ENST00000515531 SCN5AQ14524 2016 aa4.65□□□□□ -1.67
SMARCA5-203ENST00000515531 PI4KAP2A4QPH2 592 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 LINC01565O15544 149 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 GRID2O43424 1007 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 ACADMP11310 421 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 ACTN1P12814 892 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 CD53P19397 219 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 ARF3P61204 181 aaPredicted RBP4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 ARF1P84077 181 aaKnown RBP4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 KRTCAP3Q53RY4 240 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 STXBP5Q5T5C0 1151 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 ACSM2BQ68CK6 577 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 FAM171BQ6P995 826 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 SLC26A9Q7LBE3 791 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 TICAM1Q8IUC6 712 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 DCUN1D3Q8IWE4 304 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 LRRC8CQ8TDW0 803 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 PPP4R1Q8TF05 950 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 SCFD2Q8WU76 684 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 TMEM255BQ8WV15 326 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 SLC44A1Q8WWI5 657 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 USP6NLQ92738 828 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 SKA1Q96BD8 255 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 MOAP1Q96BY2 351 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 ZNF583Q96ND8 569 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 SMC6Q96SB8 1091 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 TRMT61BQ9BVS5 477 aaKnown RBP4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 MMP28Q9H239 520 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 EPB41L5Q9HCM4 733 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 MTMR10Q9NXD2 777 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 FAF1Q9UNN5 650 aaPredicted RBP4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 DLGAP4Q9Y2H0 992 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 SESN1Q9Y6P5 492 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 ITIH6Q6UXX5 1313 aa4.64□□□□□ -1.67
SMARCA5-203ENST00000515531 P2RY10O00398 339 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 HS6ST1O60243 411 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 UMODP07911 640 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 ANXA7P20073 488 aaKnown RBP4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 NR2F2P24468 414 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 HOXA1P49639 335 aaPredicted RBP4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 MMP14P50281 582 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 SREBF2Q12772 1141 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 NSUN5P2Q63ZY6 315 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 RAD9BQ6WBX8 426 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 NFE4Q86UQ8 179 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 HES6Q96HZ4 224 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 EGLN2Q96KS0 407 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 ITPAQ9BY32 194 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 FTOQ9C0B1 505 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 SDF2L1Q9HCN8 221 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 ZFP57Q9NU63 452 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 MAP3K20Q9NYL2 800 aaKnown RBP4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 TAAR2Q9P1P5 351 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 MARCH4Q9P2E8 410 aaPredicted RBP4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 POLG2Q9UHN1 485 aa4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 LAS1LQ9Y4W2 734 aaKnown RBP4.63□□□□□ -1.67
SMARCA5-203ENST00000515531 ZCWPW2A0A1B0GU75 182 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 MAP2K7O14733 419 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 EIF3DO15371 548 aaKnown RBP eCLIP4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 BAIAP3O94812 1187 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 ZNF23P17027 643 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 MSH2P43246 934 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 MLLT10P55197 1068 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 DCAF7P61962 342 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 IKQ13123 557 aaPredicted RBP4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 ZNF628Q5EBL2 1059 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 SIRPB2Q5JXA9 342 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 LCN10Q6JVE6 187 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 ZNF852Q6ZMS4 543 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 USP43Q70EL4 1123 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 SMIM29Q86T20 159 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 ANKRD52Q8NB46 1076 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 PHF21AQ96BD5 680 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 LINGO1Q96FE5 620 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 ELMOD3Q96FG2 381 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 TIGD1Q96MW7 591 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 SEPT11Q9NVA2 429 aaKnown RBP4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 DBNLQ9UJU6 430 aaKnown RBP4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 PRAG1Q86YV5 1406 aa4.62□□□□□ -1.67
SMARCA5-203ENST00000515531 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 FRMD3A2A2Y4 597 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 OR5K3A6NET4 321 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 ANKRD66B4E2M5 251 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 BUD23O43709 281 aaKnown RBP4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 SYNGR3O43761 229 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 KRT86O43790 486 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 WDHD1O75717 1129 aaPredicted RBP4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 SRPRAP08240 638 aaKnown RBP4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 CLTBP09497 229 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 MARK3P27448 753 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 GAGE5Q13069 117 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 GAGE6Q13070 117 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 ACVR2BQ13705 512 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 KRT81Q14533 505 aa4.61□□□□□ -1.67
SMARCA5-203ENST00000515531 PCGF3Q3KNV8 242 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms