RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, human

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPG1-208	ENST00000513965	QPCT	Q16769	361 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	INSC	Q1MX18	579 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	HENMT1	Q5T8I9	393 aa	Known RBP	11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	CACHD1	Q5VU97	1274 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	FAM92B	Q6ZTR7	304 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	TMEM26	Q6ZUK4	368 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	LRRC49	Q8IUZ0	686 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	CCDC13	Q8IYE1	715 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	KCTD6	Q8NC69	237 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	CCNY	Q8ND76	341 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	ARRDC2	Q8TBH0	407 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	TEKT4	Q8WW24	435 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	TRIM11	Q96F44	468 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	THAP2	Q9H0W7	228 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	ISCU	Q9H1K1	167 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	CARD9	Q9H257	536 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	SIDT1	Q9NXL6	827 aa	Known RBP	11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	IP6K2	Q9UHH9	426 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	ANAPC7	Q9UJX3	599 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	DNPEP	Q9ULA0	475 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	PADI1	Q9ULC6	663 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	SHOC2	Q9UQ13	582 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	POLH	Q9Y253	713 aa		11.21	□□□□□ -0.61
COPG1-208	ENST00000513965	VPS4B	O75351	444 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	MTX2	O75431	263 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	SPAG6	O75602	509 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	DNAJB5	O75953	348 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	C9	P02748	559 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	XRCC1	P18887	633 aa	Predicted RBP	11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	GNLY	P22749	145 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	CCNC	P24863	283 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	SLC19A1	P41440	591 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	UQCRFS1	P47985	274 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	DRG2	P55039	364 aa	Known RBP	11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	UBE2I	P63279	158 aa	Known RBP	11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	DPYSL3	Q14195	570 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	NFKBIB	Q15653	356 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	IFI16	Q16666	785 aa	Known RBP	11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	FILIP1L	Q4L180	1135 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	ZFYVE27	Q5T4F4	411 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	NCBP2-AS2	Q69YL0	99 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	TIGD7	Q6NT04	549 aa	Predicted RBP	11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	TCTN3	Q6NUS6	607 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	IRGC	Q6NXR0	463 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	RBM43	Q6ZSC3	357 aa	Known RBP	11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	CPNE8	Q86YQ8	564 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	MAML1	Q92585	1016 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	EID2B	Q96D98	161 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	NUP85	Q9BW27	656 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	EPB41L1	Q9H4G0	881 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	TRIM39	Q9HCM9	518 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	HAUS2	Q9NVX0	235 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	VPS4A	Q9UN37	437 aa		11.2	□□□□□ -0.62
COPG1-208	ENST00000513965	FLNC	Q14315	2725 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	MN1	Q10571	1320 aa	Predicted RBP	11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	LILRA5	A6NI73	299 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	OR52A4P	A6NMU1	304 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	MYO1F	O00160	1098 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	KCNK1	O00180	336 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	CREG1	O75629	220 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	RFPL1	O75677	317 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	MTA2	O94776	668 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	AGFG2	O95081	481 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	PDGFA	P04085	211 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	ANKRD34C	P0C6C1	535 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	CASP14	P31944	242 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	PRKCI	P41743	596 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	RPL26	P61254	145 aa	Known RBP	11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	GBE1	Q04446	702 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	MAP7	Q14244	749 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	IL11RA	Q14626	422 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	KCNAB1	Q14722	419 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	HADH	Q16836	314 aa	Known RBP	11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	CRTC2	Q53ET0	693 aa	Predicted RBP	11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	ZNF569	Q5MCW4	686 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	ADGRG6	Q86SQ4	1221 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	TTC30B	Q8N4P2	665 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	EFCAB3	Q8N7B9	438 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	AVL9	Q8NBF6	648 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	GPR26	Q8NDV2	337 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	RSC1A1	Q92681	617 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	LYSMD1	Q96S90	227 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	ADGRE3	Q9BY15	652 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	TRIM55	Q9BYV6	548 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	BRD8	Q9H0E9	1235 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	ZFYVE1	Q9HBF4	777 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	KCND3	Q9UK17	655 aa		11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	RPL26L1	Q9UNX3	145 aa	Known RBP	11.19	□□□□□ -0.62
COPG1-208	ENST00000513965	RGSL1	A5PLK6	1076 aa		11.18	□□□□□ -0.62
COPG1-208	ENST00000513965	TIAF1	O95411	115 aa		11.18	□□□□□ -0.62
COPG1-208	ENST00000513965	MMP2	P08253	660 aa		11.18	□□□□□ -0.62
COPG1-208	ENST00000513965	ZNF7	P17097	686 aa	Predicted RBP	11.18	□□□□□ -0.62
COPG1-208	ENST00000513965	CCL11	P51671	97 aa		11.18	□□□□□ -0.62
COPG1-208	ENST00000513965	ARSE	P51690	589 aa		11.18	□□□□□ -0.62
COPG1-208	ENST00000513965	PPP1CA	P62136	330 aa		11.18	□□□□□ -0.62
COPG1-208	ENST00000513965	RPS18	P62269	152 aa	Known RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms