RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 KNL1Q8NG31 2342 aa9.71□□□□□ -0.86
TOPBP1-209ENST00000513818 FAM186AA6NE01 2351 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PRSS38A1L453 326 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 SDR42E2A6NKP2 422 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 FFAR2O15552 330 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 NME1P15531 152 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF8P17098 575 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 TEAD1P28347 426 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PBLDP30039 288 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 HADHAP40939 763 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 ELK3P41970 407 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 CTSCP53634 463 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 ARL4CP56559 192 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PRAMEP78395 509 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 B4GALNT1Q00973 533 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PDE1BQ01064 536 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PPARDQ03181 441 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 ACVR1Q04771 509 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PDIA2Q13087 525 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PTK2BQ14289 1009 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 DBN1Q16643 649 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 SKIDA1Q1XH10 827 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 DNAJC21Q5F1R6 531 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PRRT3Q5FWE3 981 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 STPG1Q5TH74 334 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 ZDHHC20Q5W0Z9 365 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 AFTPHQ6ULP2 937 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 TAS2R42Q7RTR8 314 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 ADGRG6Q86SQ4 1221 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 NLRP8Q86W28 1048 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 SERPINA9Q86WD7 417 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 RAVER1Q8IY67 606 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF548Q8NEK5 533 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 CCL4L1Q8NHW4 92 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 LMX1AQ8TE12 382 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 BTN2A2Q8WVV5 523 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 IFT81Q8WYA0 676 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 STAMBPL1Q96FJ0 436 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 VPS35Q96QK1 796 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 KIFC1Q9BW19 673 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 ZDHHC5Q9C0B5 715 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 PLAC1Q9HBJ0 212 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 MRM3Q9HC36 420 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 WHRNQ9P202 907 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 FAM8A1Q9UBU6 413 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 APPL1Q9UKG1 709 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 BTBD3Q9Y2F9 522 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 RPS6KL1Q9Y6S9 549 aa9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 V9GYY5 206 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 RIF1Q5UIP0 2472 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-209ENST00000513818 OR2AG2A6NM03 316 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 H3BM21 787 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 H7C0S8 307 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 AP3B1O00203 1094 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 PPFIA2O75334 1257 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 PIAS2O75928 621 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 VAPBO95292 243 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 CSF2P04141 144 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 PYGLP06737 847 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 MYF5P13349 255 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 ACP5P13686 325 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 HOXB1P14653 301 aaPredicted RBP9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 PGAM1P18669 254 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 KELP23276 732 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 PSMA3P25788 255 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 AK4P27144 223 aaPredicted RBP9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 ECHS1P30084 290 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 CARSP49589 748 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 HK3P52790 923 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 CACNG1Q06432 222 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 ITGA9Q13797 1035 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 HLTFQ14527 1009 aaKnown RBP eCLIP9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 CRYMQ14894 314 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 ANKRD20A4Q4UJ75 823 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 UBAP2Q5T6F2 1119 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 PDPK2PQ6A1A2 396 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 IL27RAQ6UWB1 636 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 SNX20Q7Z614 316 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 GALNT13Q8IUC8 556 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 TRAPPC5Q8IUR0 188 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 SPNS2Q8IVW8 549 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 SFTPA2Q8IWL1 248 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 ZBED8Q8IZ13 594 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 PDIK1LQ8N165 341 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 NXPE1Q8N323 547 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 OXR1Q8N573 874 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 BEND7Q8N7W2 519 aaPredicted RBP9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 RASGEF1AQ8N9B8 481 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 BBOF1Q8ND07 529 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 FBXO36Q8NEA4 188 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 DDHD1Q8NEL9 900 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 FAM174AQ8TBP5 190 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 ART4Q93070 314 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 CAMK1GQ96NX5 476 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 OR2M4Q96R27 311 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 CLPBQ9H078 707 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 TMEM168Q9H0V1 697 aa9.69□□□□□ -0.86
TOPBP1-209ENST00000513818 CDH19Q9H159 772 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms