RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 MSI2Q96DH6 328 aaKnown RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 PABPC5Q96DU9 382 aaKnown RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 FCRL4Q96PJ5 515 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 SLITRK1Q96PX8 696 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 KXD1Q9BQD3 176 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 BICC1Q9H694 974 aaKnown RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 RANGRFQ9HD47 186 aaPredicted RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 CD209Q9NNX6 404 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 MYOZ2Q9NPC6 264 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 RNF7Q9UBF6 113 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 TTC7AQ9ULT0 858 aaPredicted RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 R3HDM2Q9Y2K5 976 aaKnown RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 AFDNP55196 1824 aaKnown RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 KDM3BQ7LBC6 1761 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 VIRMAQ69YN4 1812 aaKnown RBP4.28□□□□□ -1.72
HTT-210ENST00000512909 TMEM202A6NGA9 273 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 LIPT2A6NK58 231 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 K7ENM7 598 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 VILLO15195 856 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 SPRY3O43610 288 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 HS6ST1O60243 411 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 PAGE4O60829 102 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 ATG13O75143 517 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 MOSPD3O75425 235 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 GFPT2O94808 682 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 RARGP13631 454 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 EDN2P20800 178 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 MCM3P25205 808 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 RGS2P41220 211 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 LMAN1P49257 510 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 SSBP2P81877 361 aaPredicted RBP4.28□□□□□ -1.72
HTT-210ENST00000512909 ZBED6P86452 979 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 MC1RQ01726 317 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 GRIK3Q13003 919 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 TWIST1Q15672 202 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 USP41Q3LFD5 358 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 MFSD4BQ5TF39 518 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 CST9Q5W186 159 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 SIGIRRQ6IA17 410 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 LINGO2Q7L985 606 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.28□□□□□ -1.72
HTT-210ENST00000512909 AGBL3Q8NEM8 1001 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 HUS1BQ8NHY5 278 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 INPP5DQ92835 1189 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 ARHGEF26Q96DR7 871 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 MMABQ96EY8 250 aaPredicted RBP4.28□□□□□ -1.72
HTT-210ENST00000512909 SAT2Q96F10 170 aaPredicted RBP4.28□□□□□ -1.72
HTT-210ENST00000512909 CCDC34Q96HJ3 373 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 CAPNS2Q96L46 248 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 NUDCD1Q96RS6 583 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 PCGF1Q9BSM1 259 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 STRA6Q9BX79 667 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 ITPAQ9BY32 194 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 DCLK3Q9C098 648 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 PLAC1Q9HBJ0 212 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 PLK2Q9NYY3 685 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 ADD3Q9UEY8 706 aaKnown RBP4.28□□□□□ -1.72
HTT-210ENST00000512909 MYO6Q9UM54 1294 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 GPR34Q9UPC5 381 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 INSL5Q9Y5Q6 135 aa4.28□□□□□ -1.72
HTT-210ENST00000512909 ASTN2O75129 1339 aaPredicted RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 MROH5Q6ZUA9 1318 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 ATXN2Q99700 1313 aaKnown RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 SCN7AQ01118 1682 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 A0A1W2PQM1 296 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 CLRN2A0PK11 232 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 TCP10L2B9ZVM9 353 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 TNFRSF13BO14836 293 aaPredicted RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 MLYCDO95822 493 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 RB1P06400 928 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 RRM1P23921 792 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 DCTDP32321 178 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 STX2P32856 288 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 ICAM3P32942 547 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 PRCPP42785 496 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 NR4A2P43354 598 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 PEX5P50542 639 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 MRPL12P52815 198 aaKnown RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 LBX1P52954 281 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 PGGT1BP53609 377 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 POLGP54098 1239 aaPredicted RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 GALCP54803 685 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 CDH8P55286 799 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 MAP2K1Q02750 393 aaPredicted RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 ACSM2AQ08AH3 577 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 PKP1Q13835 747 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 MYBPC2Q14324 1141 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 ZNF260Q3ZCT1 412 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 EFHC1Q5JVL4 640 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 GGNBP1Q5YKI7 109 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 ACSM2BQ68CK6 577 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 METTL2BQ6P1Q9 378 aaKnown RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 TMED8Q6PL24 325 aaPredicted RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 FJX1Q86VR8 437 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 ITPRIPQ8IWB1 547 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 SRBD1Q8N5C6 995 aaKnown RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 CCDC89Q8N998 374 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 ZKSCAN4Q969J2 545 aaPredicted RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 CDCA5Q96FF9 252 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms