RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 TLK1Q9UKI8 766 aa10.28□□□□□ -0.76
DDX41-211ENST00000510171 PADI1Q9ULC6 663 aa10.28□□□□□ -0.76
DDX41-211ENST00000510171 VPS4AQ9UN37 437 aa10.28□□□□□ -0.76
DDX41-211ENST00000510171 TTLL3Q9Y4R7 772 aa10.28□□□□□ -0.76
DDX41-211ENST00000510171 SYCE3A1L190 88 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 CDC14CA4D256 554 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 TTLL8A6PVC2 850 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 SPAG6O75602 509 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 RFPL1O75677 317 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 RASSF9O75901 435 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 KIAA0754O94854 1291 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 SLC25A14O95258 325 aaPredicted RBP10.27□□□□□ -0.77
DDX41-211ENST00000510171 RECKO95980 971 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 MT-ND3P03897 115 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 ZNF8P17098 575 aaPredicted RBP10.27□□□□□ -0.77
DDX41-211ENST00000510171 XRCC1P18887 633 aaPredicted RBP10.27□□□□□ -0.77
DDX41-211ENST00000510171 IL4RP24394 825 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 CCNCP24863 283 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 LEPRP48357 1165 aaKnown RBP10.27□□□□□ -0.77
DDX41-211ENST00000510171 SEPHS1P49903 392 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 PMS2P54278 862 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 SH3BP2P78314 561 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 GALNT2Q10471 571 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 TDRD12Q587J7 1177 aaKnown RBP10.27□□□□□ -0.77
DDX41-211ENST00000510171 FHL5Q5TD97 284 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 ALG1LQ6GMV1 187 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 TMEM26Q6ZUK4 368 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 TMEM135Q86UB9 458 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 EFCAB3Q8N7B9 438 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 ARRDC2Q8TBH0 407 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 TSGA13Q96PP4 275 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 MLPHQ9BV36 600 aaPredicted RBP10.27□□□□□ -0.77
DDX41-211ENST00000510171 TWSG1Q9GZX9 223 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 OR2AG1Q9H205 316 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 ZNF768Q9H5H4 540 aaKnown RBP10.27□□□□□ -0.77
DDX41-211ENST00000510171 CBX8Q9HC52 389 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 TRIM39Q9HCM9 518 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 SLC30A1Q9Y6M5 507 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 COL12A1Q99715 3063 aa10.27□□□□□ -0.77
DDX41-211ENST00000510171 PTPN13Q12923 2485 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ANKRD66B4E2M5 251 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 GPR89AB7ZAQ6 455 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 GOLGA6L19H0YKK7 550 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 CREG1O75629 220 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 AGFG2O95081 481 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 GPR89BP0CG08 455 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 FGF5P12034 268 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 SKILP12757 684 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 CASP14P31944 242 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 SLC19A1P41440 591 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 SSR1P43307 286 aaKnown RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 UBASH3AP57075 661 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ZBED6P86452 979 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 FANCCQ00597 558 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 NIPAL4Q0D2K0 466 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 DNASE1L3Q13609 305 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 PAFAH1B3Q15102 231 aaKnown RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 IFI16Q16666 785 aaKnown RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 QPCTQ16769 361 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ZNF648Q5T619 568 aaPredicted RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 CACHD1Q5VU97 1274 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 CYB5D1Q6P9G0 228 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ADGRG6Q86SQ4 1221 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 LUZP1Q86V48 1076 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 PPP1R3BQ86XI6 285 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 APLFQ8IW19 511 aaPredicted RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 GALNT11Q8NCW6 608 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 FATE1Q969F0 183 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ZDHHC12Q96GR4 267 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 SPATA16Q9BXB7 569 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ADGRE3Q9BY15 652 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ARFGAP3Q9NP61 516 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 SCHIP1Q9P0W5 487 aaPredicted RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 ZNF624Q9P2J8 865 aaPredicted RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 PLEKHB1Q9UF11 243 aaPredicted RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 SLC23A2Q9UGH3 650 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 IP6K2Q9UHH9 426 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 LNPEPQ9UIQ6 1025 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 PCDHGA6Q9Y5G7 932 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
DDX41-211ENST00000510171 ZFC3H1O60293 1989 aaKnown RBP10.26□□□□□ -0.77
DDX41-211ENST00000510171 ANKRD36A6QL64 1941 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 DOPEY2Q9Y3R5 2298 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 GOLGA6L3A6NEY3 463 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 PDZK1P1A8MUH7 402 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 C21orf140B9A014 251 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 KMOO15229 486 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 KIF1CO43896 1103 aaKnown RBP10.25□□□□□ -0.77
DDX41-211ENST00000510171 MFSD11O43934 449 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 MTA2O94776 668 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 SERPING1P05155 500 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 TPM3P06753 285 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 CD48P09326 243 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 ZNF7P17097 686 aaPredicted RBP10.25□□□□□ -0.77
DDX41-211ENST00000510171 GNLYP22749 145 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 PBX1P40424 430 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 UQCRFS1P47985 274 aa10.25□□□□□ -0.77
DDX41-211ENST00000510171 SLC25A11Q02978 314 aaKnown RBP10.25□□□□□ -0.77
DDX41-211ENST00000510171 SEMA5AQ13591 1074 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms