RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 PPP3CCP48454 512 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 CCR3P51677 355 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 PGDP52209 483 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 BCAT1P54687 386 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 CDH8P55286 799 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 TPTEP56180 551 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 TNNC1P63316 161 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 NOP14P78316 857 aaKnown RBP3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 ZXDBP98169 803 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 E2F1Q01094 437 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 TRPC3Q13507 836 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 RUNX3Q13761 415 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 PON2Q15165 354 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SGSM1Q2NKQ1 1148 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 EDRF1Q3B7T1 1238 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 ZACNQ401N2 412 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 ZNF667Q5HYK9 610 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 MDH1BQ5I0G3 518 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 DGKKQ5KSL6 1271 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 C1orf220Q5T0J3 134 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 VSTM1Q6UX27 236 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 Q6ZS52 159 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 DENND5BQ6ZUT9 1274 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 PAQR9Q6ZVX9 377 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 Q6ZWC4 215 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 PARS2Q7L3T8 475 aaKnown RBP3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SCN4BQ8IWT1 228 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SDR16C5Q8N3Y7 309 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SPEM1Q8N4L4 309 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 DCLK2Q8N568 766 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 C11orf44Q8N8P7 122 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 ARL14EPQ8N8R7 260 aaPredicted RBP3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 TRIML1Q8N9V2 468 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 ATP11CQ8NB49 1132 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 FAM98AQ8NCA5 519 aaKnown RBP3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 GPT2Q8TD30 523 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 MRPS31Q92665 395 aaKnown RBP3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SMARCE1Q969G3 411 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 CCDC47Q96A33 483 aaKnown RBP3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SYAP1Q96A49 352 aaPredicted RBP3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 PRR25Q96S07 402 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 KCNK16Q96T55 309 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 TIMP4Q99727 224 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 MACROD1Q9BQ69 325 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 TRIM5Q9C035 493 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SDCBP2Q9H190 292 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SNX25Q9H3E2 840 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 CLSTN2Q9H4D0 955 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 EBF3Q9H4W6 596 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SMYD3Q9H7B4 428 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 KIF9Q9HAQ2 790 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 HPS4Q9NQG7 708 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 GKN1Q9NS71 199 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 TMEM30AQ9NV96 361 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 C2orf42Q9NWW7 574 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 EHD2Q9NZN4 543 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SH3BP4Q9P0V3 963 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 DKK4Q9UBT3 224 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 LPAR3Q9UBY5 353 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 PADI4Q9UM07 663 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 PHTF1Q9UMS5 762 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 ARHGAP26Q9UNA1 814 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 SH2B3Q9UQQ2 575 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 MUC6Q6W4X9 2439 aa3.65□□□□□ -1.83
UBE2D3-226ENST00000508635 TRAV19A0A0A6YYK7 116 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 AQP7P3A6NL99 342 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 CLDN5O00501 218 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 CES2O00748 559 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 CETN3O15182 167 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 ATG13O75143 517 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 AKAP3O75969 853 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 INMTO95050 263 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 ASS1P00966 412 aaKnown RBP3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 OAS1P00973 400 aaKnown RBP3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 NPSP0C0P6 89 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 ZDHHC11BP0C7U3 371 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 ARSAP15289 507 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 TNFSF4P23510 183 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 NR2F2P24468 414 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 FPR3P25089 353 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 EPHA3P29320 983 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 HOXA6P31267 233 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 HOXC13P31276 330 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 GTF2H1P32780 548 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 PSMC2P35998 433 aaKnown RBP3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 PPP1R2P41236 205 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 VAMP7P51809 220 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 ELLP55199 621 aaPredicted RBP3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 CYP4F2P78329 520 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 SLC7A9P82251 487 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 FKBP3Q00688 224 aaKnown RBP3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 LRRC63Q05C16 580 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 DMWDQ09019 674 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 GRSF1Q12849 480 aaKnown RBP eCLIP3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 TAF10Q12962 218 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 BIRC3Q13489 604 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 PMS2P11Q13670 270 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 MTF1Q14872 753 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 PDGFRLQ15198 375 aa3.64□□□□□ -1.83
UBE2D3-226ENST00000508635 ZNF77Q15935 545 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms