RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 SUCOQ9UBS9 1254 aaKnown RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 PCDHGB4Q9UN71 923 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 PCDHGB5Q9Y5G0 923 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 ARPC2O15144 300 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 SLC22A2O15244 555 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 DEAF1O75398 565 aaPredicted RBP12.77□□□□□ -0.36
SMG7-214ENST00000508461 TMCC1O94876 653 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 CPSF4O95639 269 aaKnown RBP12.77□□□□□ -0.36
SMG7-214ENST00000508461 HALP42357 657 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 DNAJB13P59910 316 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 HMGCS1Q01581 520 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 BCL2L1Q07817 233 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 MAPKAPK3Q16644 382 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 CHSY3Q70JA7 882 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 ANKRD46Q86W74 232 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 SEPT8Q92599 483 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 SCLYQ96I15 445 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 FEM1CQ96JP0 617 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 ADI1Q9BV57 179 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 DMTF1Q9Y222 760 aa12.77□□□□□ -0.36
SMG7-214ENST00000508461 TRMUO75648 421 aaKnown RBP12.77□□□□□ -0.37
SMG7-214ENST00000508461 SLC25A14O95258 325 aaPredicted RBP12.77□□□□□ -0.37
SMG7-214ENST00000508461 ARHGDIAP52565 204 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 ZNF419Q96HQ0 510 aaPredicted RBP12.77□□□□□ -0.37
SMG7-214ENST00000508461 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMG7-214ENST00000508461 FBXL20Q96IG2 436 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 TSSK3Q96PN8 268 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 INVSQ9Y283 1065 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 CENPFP49454 3210 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 CEP350Q5VT06 3117 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 ZNF623O75123 536 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 RPLP2P05387 115 aaKnown RBP12.77□□□□□ -0.37
SMG7-214ENST00000508461 FCGR1AP12314 374 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 PBLDP30039 288 aaPredicted RBP12.77□□□□□ -0.37
SMG7-214ENST00000508461 GSK3BP49841 420 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 PRKCQQ04759 706 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 MYLK3Q32MK0 819 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 PSAPL1Q6NUJ1 521 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 ZDHHC13Q8IUH4 622 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 COMMD8Q9NX08 183 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 SPO11Q9Y5K1 396 aa12.77□□□□□ -0.37
SMG7-214ENST00000508461 MTMR11A4FU01 709 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 OR6C75A6NL08 312 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 PRMT5O14744 637 aaPredicted RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 H6PDO95479 791 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 PRAMEF1O95521 474 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 CKBP12277 381 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 HOXD8P13378 290 aaPredicted RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 CAPN3P20807 821 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 MAGEA12P43365 314 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 TUFMP49411 452 aaKnown RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 ACLYP53396 1101 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 BFSP2Q13515 415 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 CRY1Q16526 586 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 SZRD1Q7Z422 152 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 TRPV1Q8NER1 839 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 OSCP1Q8WVF1 389 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 MEAF6Q9HAF1 191 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 PNMA8BQ9ULN7 279 aaPredicted RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 ASB3Q9Y575 518 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 A0A1W2PQ67 120 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 SLC38A8A6NNN8 435 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 MUSKO15146 869 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 ULK1O75385 1050 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 HOXD10P28358 340 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 ADAM17P78536 824 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 ELAVL2Q12926 359 aaKnown RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 BNIP2Q12982 314 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 C18orf21Q32NC0 220 aaPredicted RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 KCTD21Q4G0X4 260 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 SMYD5Q6GMV2 418 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 DTNBP1Q96EV8 351 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 FAM126AQ9BYI3 521 aaPredicted RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 CROCCQ5TZA2 2017 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 BBIP1A8MTZ0 92 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 FBP2O00757 339 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 VPS4BO75351 444 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 CLDN11O75508 207 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 EFNA1P20827 205 aaPredicted RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 ADARP55265 1226 aaKnown RBP12.76□□□□□ -0.37
SMG7-214ENST00000508461 TTLL9Q3SXZ7 439 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 UGT2A3Q6UWM9 527 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 ANKS3Q6ZW76 656 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 OR52B6Q8NGF0 335 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 ZFP28Q8NHY6 868 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 GRIN3AQ8TCU5 1115 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 SELENOMQ8WWX9 145 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 TMIGD2Q96BF3 282 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 Q9Y3F1 56 aa12.76□□□□□ -0.37
SMG7-214ENST00000508461 A0A1B0GTW7 788 aa12.75□□□□□ -0.37
SMG7-214ENST00000508461 NME4O00746 187 aa12.75□□□□□ -0.37
SMG7-214ENST00000508461 UBFD1O14562 309 aaKnown RBP12.75□□□□□ -0.37
SMG7-214ENST00000508461 LDB2O43679 373 aa12.75□□□□□ -0.37
SMG7-214ENST00000508461 MAN1A2O60476 641 aa12.75□□□□□ -0.37
SMG7-214ENST00000508461 FOXD2O60548 495 aaPredicted RBP12.75□□□□□ -0.37
SMG7-214ENST00000508461 PRAMEF11O60813 436 aa12.75□□□□□ -0.37
SMG7-214ENST00000508461 ZBTB11O95625 1053 aaPredicted RBP12.75□□□□□ -0.37
SMG7-214ENST00000508461 ADRA1AP35348 466 aa12.75□□□□□ -0.37
SMG7-214ENST00000508461 APLP1P51693 650 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms