RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TEDDM1Q5T9Z0 273 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ZDHHC20Q5W0Z9 365 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ALS2CLQ60I27 953 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 LAIR1Q6GTX8 287 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 CCDC70Q6NSX1 233 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF549Q6P9A3 640 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF449Q6P9G9 518 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ZC3H14Q6PJT7 736 aaKnown RBP4.89□□□□□ -1.63
LMNB1-208ENST00000504788 PACS1Q6VY07 963 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 Q6ZSR6 202 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 NLRP9Q7RTR0 991 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 SNX20Q7Z614 316 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 LDB1Q86U70 411 aaPredicted RBP4.89□□□□□ -1.63
LMNB1-208ENST00000504788 NRROSQ86YC3 692 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ANKMY2Q8IV38 441 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ZBED8Q8IZ13 594 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 RASGEF1AQ8N9B8 481 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ACVR1CQ8NER5 493 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 FAM174AQ8TBP5 190 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF398Q8TD17 642 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 GANCQ8TET4 914 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.89□□□□□ -1.63
LMNB1-208ENST00000504788 OR1E3Q8WZA6 343 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 LPGAT1Q92604 370 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 CERS2Q96G23 380 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 HIC2Q96JB3 615 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 FMO2Q99518 471 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 NAT9Q9BTE0 207 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 DHRS4Q9BTZ2 278 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 TWSG1Q9GZX9 223 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 CLPBQ9H078 707 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ARRDC1-AS1Q9H2J1 176 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 TCEAL2Q9H3H9 227 aaPredicted RBP4.89□□□□□ -1.63
LMNB1-208ENST00000504788 SMOC1Q9H4F8 434 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ERVMER34-1Q9H9K5 563 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 MRPL40Q9NQ50 206 aaKnown RBP4.89□□□□□ -1.63
LMNB1-208ENST00000504788 PKD2L2Q9NZM6 624 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 VPS18Q9P253 973 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ATXN10Q9UBB4 475 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 RABGEF1Q9UJ41 708 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 APPL1Q9UKG1 709 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 CDYLQ9Y232 598 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 PCDHGA4Q9Y5G9 962 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 SNX11Q9Y5W9 270 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 PRSS21Q9Y6M0 314 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 FREM2Q5SZK8 3169 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 ZFHX4Q86UP3 3567 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 RP1P56715 2156 aa4.89□□□□□ -1.63
LMNB1-208ENST00000504788 GOLGA4Q13439 2230 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 A0A1B0GVT2 93 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TLR4O00206 839 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 FPGTO14772 594 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TNFRSF10CO14798 259 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TM4SF5O14894 197 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 INPP4BO15327 924 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 MTX2O75431 263 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 RHOBTB1O94844 696 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TTC4O95801 387 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SLC4A1P02730 911 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 AHSGP02765 367 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CSF2P04141 144 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PCCBP05166 539 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 POLBP06746 335 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CELA2BP08218 269 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 THEGLP0DJG4 465 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ERVK-10P10266 1014 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 NME1P15531 152 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF8P17098 575 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 NFKBIAP25963 317 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 AKT2P31751 481 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SLC1A2P43004 574 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 RABIFP47224 123 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 POLD2P49005 469 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LMAN1P49257 510 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TUBB4BP68371 445 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CACNG1Q06432 222 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TMEM115Q12893 351 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 GRIK2Q13002 908 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SGCGQ13326 291 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CTBP1Q13363 440 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SEPT6Q14141 434 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ELF2Q15723 593 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CCDC6Q16204 474 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PYCR3Q53H96 274 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 HSP90AA5PQ58FG0 334 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SPANXN3Q5MJ09 141 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 WDR45BQ5MNZ6 344 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CTSL3PQ5NE16 218 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 MACC1Q6ZN28 852 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PTAR1Q7Z6K3 402 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SERPINA9Q86WD7 417 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 C17orf82Q86X59 251 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CCNJLQ8IV13 435 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 RASGRP3Q8IV61 690 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SFTPA2Q8IWL1 248 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 IFT20Q8IY31 132 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SLC25A45Q8N413 288 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 DCLK2Q8N568 766 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 OXR1Q8N573 874 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CLDN19Q8N6F1 224 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms