RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 EXTL1Q92935 676 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SNAPC3Q92966 411 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SARGQ9BW04 601 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 NGBQ9NPG2 151 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 PNPLA3Q9NST1 481 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 ANKMY1Q9P2S6 941 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 PALD1Q9ULE6 856 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 PPT2Q9UMR5 302 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 PPIEQ9UNP9 301 aaKnown RBP6.22□□□□□ -1.41
CLCN3-204ENST00000504131 LOC390937A0A1W2PQ73 354 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 DCDC2CA8MYV0 355 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 hCG_2039718K7EN88 272 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SLC9A3R1O14745 358 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SLC31A2O15432 143 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 AKR7A2O43488 359 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SLC28A2O43868 658 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 FGF4P08620 206 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 CYP2C8P10632 490 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 GLDCP23378 1020 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 TALDO1P37837 337 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SLC26A2P50443 739 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 CLCN7P51798 805 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 NRLP54845 237 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 NCALDP61601 193 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 PMPCAQ10713 525 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 MAPK7Q13164 816 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 PFKFB3Q16875 520 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-204ENST00000504131 NADK2Q4G0N4 442 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 AKR1C8PQ5T2L2 129 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 CENPPQ6IPU0 288 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 POTEHQ6S545 545 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 C11orf57Q6ZUT1 292 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-204ENST00000504131 FAR1Q8WVX9 515 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 GJA10Q969M2 543 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.22□□□□□ -1.41
CLCN3-204ENST00000504131 IFT43Q96FT9 208 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 FOPNLQ96NB1 174 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 NEDD4LQ96PU5 975 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SORBS1Q9BX66 1292 aaKnown RBP6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SUCNR1Q9BXA5 334 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 PABPC3Q9H361 631 aaKnown RBP6.22□□□□□ -1.41
CLCN3-204ENST00000504131 SPON1Q9HCB6 807 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 MAP10Q9P2G4 905 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 ANKRD6Q9Y2G4 727 aa6.22□□□□□ -1.41
CLCN3-204ENST00000504131 A6NJY4 79 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 FAM196BA6NMK8 535 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 DBX1A6NMT0 343 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 H3BNX3 289 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 POLRMTO00411 1230 aaKnown RBP6.21□□□□□ -1.41
CLCN3-204ENST00000504131 LILRB5O75023 590 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 CYP11A1P05108 521 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 THRAP10827 490 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 CTSSP25774 331 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 SHMT1P34896 483 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 MAGEB1P43366 347 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 PSMC5P62195 406 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 MPP1Q00013 466 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 GCNT1Q02742 428 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF616Q08AN1 781 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 PPP1R3AQ16821 1122 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 C2orf76Q3KRA6 126 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 SPANXN2Q5MJ10 180 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 CCNYL2Q5T2Q4 361 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 LIPJQ5W064 366 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 ABLIM2Q6H8Q1 611 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 PLET1Q6UQ28 207 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 C3orf62Q6ZUJ4 267 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 CATSPERDQ86XM0 798 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF454Q8N9F8 522 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 TDRD5Q8NAT2 981 aaKnown RBP6.21□□□□□ -1.41
CLCN3-204ENST00000504131 SLC13A3Q8WWT9 602 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 C22orf15Q8WYQ4 148 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 TMIGD2Q96BF3 282 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 MED15Q96RN5 788 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 RANBP9Q96S59 729 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 SLC9A7Q96T83 725 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 FICDQ9BVA6 458 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 DZANK1Q9NVP4 752 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 SIRT5Q9NXA8 310 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 UBQLN2Q9UHD9 624 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 STARD10Q9Y365 291 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 TESMINQ9Y4I5 508 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 PIAS3Q9Y6X2 628 aa6.21□□□□□ -1.41
CLCN3-204ENST00000504131 MSH4O15457 936 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 IL18RAPO95256 599 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 OPN1MWP04001 364 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 OPN1MW2P0DN77 364 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 OPN1MW3P0DN78 364 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 UGT2B10P36537 528 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PRKAG1P54619 331 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 NME3Q13232 169 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 TAF1AQ15573 450 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 TRAM1Q15629 374 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 DPYSL2Q16555 572 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 DARS2Q6PI48 645 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ANKRD44Q8N8A2 993 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 SETD9Q8NE22 299 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 C9orf72Q96LT7 481 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF558Q96NG5 402 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ADAM2Q99965 735 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms