RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SFT2D3Q587I9 215 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RBM48Q5RL73 367 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CGB2Q6NT52 195 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 POTEGQ6S5H5 508 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 DNAAF5Q86Y56 855 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NDUFAF2Q8N183 169 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF786Q8N393 782 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 KCT2Q8NC54 265 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ABHD11Q8NFV4 315 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RORBQ92753 470 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SGTBQ96EQ0 304 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CENPNQ96H22 339 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 FAM111AQ96PZ2 611 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 DCUN1D5Q9BTE7 237 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 EMILIN2Q9BXX0 1053 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GOLPH3Q9H4A6 298 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 DPEP3Q9H4B8 488 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SCPEP1Q9HB40 452 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PRMT7Q9NVM4 692 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ING3Q9NXR8 418 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NSMCE4AQ9NXX6 385 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 DCDC2Q9UHG0 476 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ADAM28Q9UKQ2 775 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CHD6Q8TD26 2715 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZCWPW2A0A1B0GU75 182 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RRN3P2A6NIE6 340 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZSCAN5BA6NJL1 495 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 USP17L10C9JJH3 530 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 F8W810 466 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SNAP23O00161 211 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NOP56O00567 594 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RIMBP2O15034 1052 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SEPT4O43236 478 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SLC7A4O43246 635 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LATO43561 262 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NDUFB5O43674 189 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SEC24AO95486 1093 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 IFNB1P01574 187 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CALB1P05937 261 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 COL6A2P12110 1019 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF26P17031 533 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ITGA2P17301 1181 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MYF6P23409 242 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PSMA4P25789 261 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SERPINH1P50454 418 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 HMGA2P52926 109 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CXCR4P61073 352 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GAD2Q05329 585 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PDIA2Q13087 525 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TARDBPQ13148 414 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MMRN1Q13201 1228 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ELOAQ14241 798 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PKN2Q16513 984 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CYP2A13Q16696 494 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TRIM60Q495X7 471 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GGTA1PQ4G0N0 100 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SNAP47Q5SQN1 464 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TTC39BQ5VTQ0 682 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 FAM117BQ6P1L5 589 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SUSD1Q6UWL2 747 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ATG14Q6ZNE5 492 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CREB3L2Q70SY1 520 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ADCK1Q86TW2 530 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CARM1Q86X55 608 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PARP8Q8N3A8 854 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ANKFN1Q8N957 763 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 OR13F1Q8NGS4 319 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PHF10Q8WUB8 498 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LIPHQ8WWY8 451 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 HSPH1Q92598 858 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 OTUB2Q96DC9 234 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PCDHB18PQ96TA0 734 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CLPBQ9H078 707 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 DYRK4Q9NR20 520 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 FBXO6Q9NRD1 293 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF275Q9NSD4 429 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SMPD3Q9NY59 655 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NCKIPSDQ9NZQ3 722 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MTRRQ9UBK8 725 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PLLPQ9Y342 182 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TRIM49D1C9J1S8 452 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TRIM13O60858 407 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LILRB5O75023 590 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ABCB7O75027 752 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NDST3O95803 873 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LDLRP01130 860 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 UGT2B4P06133 528 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 C6orf222P0C671 652 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GLULP15104 373 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 HSD3B2P26439 372 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 HOXD9P28356 352 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PCSK6P29122 969 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CDKN2BP42772 138 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 AP1S2P56377 157 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 YWHAEP62258 255 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PHC1P78364 1004 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 VAC14Q08AM6 782 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 STK11Q15831 433 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PTPROQ16827 1216 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GDPGP1Q6ZNW5 385 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms