RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 MAGEA8P43361 318 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 STC1P52823 247 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 TRAF2Q12933 501 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 CBX3Q13185 183 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 TGFBIQ15582 683 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 TIGD2Q4W5G0 525 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 ALFQ53S48 1182 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 OTUD3Q5T2D3 398 aaPredicted RBP24.31■■□□□ 1.48
DDX41-202ENST00000503078 C16orf87Q6PH81 154 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 DCDC5Q6ZRR9 648 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 RIMKLAQ8IXN7 391 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 SFRP1Q8N474 314 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 OR13C4Q8NGS5 318 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 FANCEQ9HB96 536 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 SUN2Q9UH99 717 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 TLR6Q9Y2C9 796 aa24.31■■□□□ 1.48
DDX41-202ENST00000503078 SNX2O60749 519 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 ECI2O75521 394 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 CHEK2O96017 543 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 PORP16435 677 aaPredicted RBP24.3■■□□□ 1.48
DDX41-202ENST00000503078 PRDX3P30048 256 aaKnown RBP24.3■■□□□ 1.48
DDX41-202ENST00000503078 BMXP51813 675 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 OVOS1Q6IE37 1185 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 PAQR3Q6TCH7 311 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 ZC3H7AQ8IWR0 971 aaKnown RBP24.3■■□□□ 1.48
DDX41-202ENST00000503078 PDPRQ8NCN5 879 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 HASPINQ8TF76 798 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 NSMCE2Q96MF7 247 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 LRRC3Q9BY71 257 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 ZNF408Q9H9D4 720 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 PALMDQ9NP74 551 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 IKZF3Q9UKT9 509 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 PCDHGA11Q9Y5H2 935 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 NLRC5Q86WI3 1866 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 IQCA1LA6NCM1 817 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 SEC14L2O76054 403 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 RHOBTB1O94844 696 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 UROSP10746 265 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 CDH1P12830 882 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 OR4D2P58180 307 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 BEX3Q00994 111 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 TMEM214Q6NUQ4 689 aaKnown RBP24.3■■□□□ 1.48
DDX41-202ENST00000503078 SYVN1Q86TM6 617 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 SPATA2LQ8IUW3 424 aaPredicted RBP24.3■■□□□ 1.48
DDX41-202ENST00000503078 SLC39A13Q96H72 371 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 PIF1Q9H611 641 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 ZIM2Q9NZV7 527 aa24.3■■□□□ 1.48
DDX41-202ENST00000503078 ESRRBO95718 433 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 NPPAP01160 153 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 FGF1P05230 155 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 OCM2P0CE71 109 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 OCMP0CE72 109 aaPredicted RBP24.29■■□□□ 1.48
DDX41-202ENST00000503078 HLA-DPA1P20036 260 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 ALDH3A2P51648 485 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 PSMD7P51665 324 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 ARSFP54793 590 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 ERVK-8P63133 956 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 MRPS6P82932 125 aaKnown RBP24.29■■□□□ 1.48
DDX41-202ENST00000503078 TSPY1Q01534 308 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 TSNQ15631 228 aaKnown RBP24.29■■□□□ 1.48
DDX41-202ENST00000503078 CRY1Q16526 586 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 TYSND1Q2T9J0 566 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 ZIK1Q3SY52 487 aaPredicted RBP24.29■■□□□ 1.48
DDX41-202ENST00000503078 BROXQ5VW32 411 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 GLYATQ6IB77 296 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 THEM5Q8N1Q8 247 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 SEMA3CQ99985 751 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 C1orf50Q9BV19 199 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 NTN4Q9HB63 628 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 COQ6Q9Y2Z9 468 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 SLC30A1Q9Y6M5 507 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 DOCK4Q8N1I0 1966 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 ANKRD36A6QL64 1941 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 CCL15-CCL14A0A0B4J2E2 113 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 FAM234BA2RU67 622 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 LCHNA4D1U4 455 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 M0QZ92 97 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 B4GAT1O43505 415 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 GJB3O75712 270 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 CPT1AP50416 773 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 SPIDRQ14159 915 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 CBX2Q14781 532 aaPredicted RBP24.29■■□□□ 1.48
DDX41-202ENST00000503078 CCL15Q16663 113 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 MS4A13Q5J8X5 152 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 CD300LGQ6UXG3 332 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 HID1Q8IV36 788 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 BRSK1Q8TDC3 778 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 BRI3BPQ8WY22 251 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 ISG20Q96AZ6 181 aaKnown RBP24.29■■□□□ 1.48
DDX41-202ENST00000503078 MAGEL2Q9UJ55 1249 aa24.29■■□□□ 1.48
DDX41-202ENST00000503078 UBA6A0AVT1 1052 aaPredicted RBP24.28■■□□□ 1.48
DDX41-202ENST00000503078 SYCE1LA8MT33 242 aa24.28■■□□□ 1.48
DDX41-202ENST00000503078 M0QZQ0 153 aa24.28■■□□□ 1.48
DDX41-202ENST00000503078 IL12AP29459 219 aa24.28■■□□□ 1.48
DDX41-202ENST00000503078 SHMT2P34897 504 aa24.28■■□□□ 1.48
DDX41-202ENST00000503078 MAPK10P53779 464 aa24.28■■□□□ 1.48
DDX41-202ENST00000503078 RAD51Q06609 339 aa24.28■■□□□ 1.48
DDX41-202ENST00000503078 TUBA3CQ13748 450 aa24.28■■□□□ 1.48
DDX41-202ENST00000503078 SCIMPQ6UWF3 145 aa24.28■■□□□ 1.48
DDX41-202ENST00000503078 OR2T11Q8NH01 316 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms