RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TMEM115Q12893 351 aaPredicted RBP24.83■■□□□ 1.57
LSM6-202ENST00000502781 IZUMO3Q5VZ72 239 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 NRROSQ86YC3 692 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 FAM181AQ8N9Y4 354 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 CCL4L1Q8NHW4 92 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 SGSM3Q96HU1 749 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 SOX13Q9UN79 622 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 SLC30A1Q9Y6M5 507 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 GOLGA8MH3BSY2 632 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 SMAPO00193 183 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 GIPC1O14908 333 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 ANXA6P08133 673 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 ALPPL2P10696 532 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 LRP8Q14114 963 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 MORF4L2Q15014 288 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 DEFB133Q30KQ1 61 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 PROX2Q3B8N5 592 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 HIBCHQ6NVY1 386 aaPredicted RBP24.82■■□□□ 1.56
LSM6-202ENST00000502781 MICALCLQ6ZW33 695 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 GKN2Q86XP6 184 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 GALNT13Q8IUC8 556 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 NXPE1Q8N323 547 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 HDAC10Q969S8 669 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 ULK4Q96C45 1275 aa24.82■■□□□ 1.56
LSM6-202ENST00000502781 CCDC162PA2VCL2 907 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 EFCAB8A8MWE9 144 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 CDK14O94921 469 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 SEC31AO94979 1220 aaKnown RBP24.81■■□□□ 1.56
LSM6-202ENST00000502781 FOXN2P32314 431 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 CTBSQ01459 385 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 CACNG1Q06432 222 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 TRIP6Q15654 476 aaKnown RBP24.81■■□□□ 1.56
LSM6-202ENST00000502781 C6orf132Q5T0Z8 1188 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 ZCCHC8Q6NZY4 707 aaKnown RBP24.81■■□□□ 1.56
LSM6-202ENST00000502781 AGGF1Q8N302 714 aaeCLIP24.81■■□□□ 1.56
LSM6-202ENST00000502781 MPP5Q8N3R9 675 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 GDAP1Q8TB36 358 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 SNF8Q96H20 258 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 ERP44Q9BS26 406 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 BOCQ9BWV1 1114 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 FTSJ1Q9UET6 329 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 CRLS1Q9UJA2 301 aa24.81■■□□□ 1.56
LSM6-202ENST00000502781 GOLGA4Q13439 2230 aaKnown RBP24.81■■□□□ 1.56
LSM6-202ENST00000502781 IGLV3-16A0A075B6K0 115 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 LY6G6EA0A0G2JKS1 128 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 SDR42E2A6NKP2 422 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 GRID2O43424 1007 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 TNFSF14O43557 240 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 CDKN1CP49918 316 aaPredicted RBP24.8■■□□□ 1.56
LSM6-202ENST00000502781 MRPS25P82663 173 aaKnown RBP24.8■■□□□ 1.56
LSM6-202ENST00000502781 ILF3Q12906 894 aaKnown RBP eCLIP24.8■■□□□ 1.56
LSM6-202ENST00000502781 PSAPL1Q6NUJ1 521 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 ZNF547Q8IVP9 402 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 PIANPQ8IYJ0 282 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 SIGLEC10Q96LC7 697 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 GSDMCQ9BYG8 508 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 ZCCHC2Q9C0B9 1178 aaKnown RBP24.8■■□□□ 1.56
LSM6-202ENST00000502781 ZNHIT2Q9UHR6 403 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 PRKAB1Q9Y478 270 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 GPSM3Q9Y4H4 160 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 U3KQA8 63 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 SPTBN2O15020 2390 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 OR51F1A6NGY5 319 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 LDOC1O95751 146 aaPredicted RBP24.8■■□□□ 1.56
LSM6-202ENST00000502781 PRSS56P0CW18 603 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 NMBRP28336 390 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 B4GALNT1Q00973 533 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 TCEA2Q15560 299 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 ZRANB3Q5FWF4 1079 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 AFTPHQ6ULP2 937 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 TAF8Q7Z7C8 310 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 CNDP2Q96KP4 475 aaKnown RBP24.8■■□□□ 1.56
LSM6-202ENST00000502781 TRIM31Q9BZY9 425 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 FAM96AQ9H5X1 160 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 PLEKHM1Q9Y4G2 1056 aa24.8■■□□□ 1.56
LSM6-202ENST00000502781 PLXNB3Q9ULL4 1909 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 MAGEB16A2A368 324 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 GOT2P00505 430 aaKnown RBP24.79■■□□□ 1.56
LSM6-202ENST00000502781 ACRV1P26436 265 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 AK4P27144 223 aaPredicted RBP24.79■■□□□ 1.56
LSM6-202ENST00000502781 ARNTP27540 789 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 RPL21P46778 160 aaKnown RBP24.79■■□□□ 1.56
LSM6-202ENST00000502781 CTSCP53634 463 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 ITGA8P53708 1063 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 DUPD1Q68J44 220 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 OGFOD3Q6PK18 319 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 C11orf96Q7Z7L8 435 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 LRRTM4Q86VH4 590 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 SERPINA9Q86WD7 417 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 RASGEF1AQ8N9B8 481 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 SCG3Q8WXD2 468 aaKnown RBP24.79■■□□□ 1.56
LSM6-202ENST00000502781 MFSD3Q96ES6 412 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 APOLD1Q96LR9 279 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 TOR4AQ9NXH8 423 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 ZDHHC3Q9NYG2 299 aa24.79■■□□□ 1.56
LSM6-202ENST00000502781 CACNA1AO00555 2505 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 FAM237BA0A1B0GVD1 139 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 PRR19A6NJB7 356 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 CLCNKAP51800 687 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 PRAMEP78395 509 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms