RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ZBTB43O43298 467 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 ATP2C2O75185 946 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 DEXIO95424 95 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 MMP1P03956 469 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 CALM1P0DP23 149 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 CALM2P0DP24 149 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 CALM3P0DP25 149 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 COX7A2P14406 83 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 PFKFB1P16118 471 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 PAFAH1B1P43034 410 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 PIP4K2AP48426 406 aaPredicted RBP4.88□□□□□ -1.63
SSR3-209ENST00000498205 MXI1P50539 228 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 LRMPQ12912 555 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 TBX2Q13207 712 aaPredicted RBP4.88□□□□□ -1.63
SSR3-209ENST00000498205 ITGADQ13349 1161 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 TRIM29Q14134 588 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 DPCR1Q3MIW9 517 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 RUSC1-AS1Q66K80 236 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 ZNF324BQ6AW86 544 aaPredicted RBP4.88□□□□□ -1.63
SSR3-209ENST00000498205 CAPRIN2Q6IMN6 1127 aaKnown RBP4.88□□□□□ -1.63
SSR3-209ENST00000498205 TYW3Q6IPR3 259 aaKnown RBP4.88□□□□□ -1.63
SSR3-209ENST00000498205 KRBA2Q6ZNG9 492 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 MOB3CQ70IA8 216 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 BRINP3Q76B58 766 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 CERS3Q8IU89 383 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 ZNF34Q8IZ26 560 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 SPC24Q8NBT2 197 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 RTP4Q96DX8 246 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 APOPT1Q96IL0 206 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 TXNDC15Q96J42 360 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 PKNOX2Q96KN3 472 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 C16orf45Q96MC5 204 aaPredicted RBP4.88□□□□□ -1.63
SSR3-209ENST00000498205 GSDMAQ96QA5 445 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 PANX2Q96RD6 677 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 H2AFJQ9BTM1 129 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 LY9Q9HBG7 655 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 SNTG1Q9NSN8 517 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 ARGLU1Q9NWB6 273 aaPredicted RBP4.88□□□□□ -1.63
SSR3-209ENST00000498205 TMOD3Q9NYL9 352 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 OR6C3Q9NZP0 311 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 V9GYY5 206 aaPredicted RBP4.88□□□□□ -1.63
SSR3-209ENST00000498205 ITIH6Q6UXX5 1313 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 UBN2Q6ZU65 1347 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 DUOX1Q9NRD9 1551 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 DLEC1Q9Y238 1755 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 TNPO2O14787 897 aaKnown RBP4.87□□□□□ -1.63
SSR3-209ENST00000498205 SMC2O95347 1197 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 URODP06132 367 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 HEXAP06865 529 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 HOXB5P09067 269 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 HNRNPA1P09651 372 aaKnown RBP eCLIP4.87□□□□□ -1.63
SSR3-209ENST00000498205 DDX5P17844 614 aaKnown RBP4.87□□□□□ -1.63
SSR3-209ENST00000498205 CLCN5P51795 746 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 SPAG1Q07617 926 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 ORC2Q13416 577 aaPredicted RBP4.87□□□□□ -1.63
SSR3-209ENST00000498205 NEDD9Q14511 834 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 ARHGEF6Q15052 776 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 ESCO2Q56NI9 601 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 PPP6R3Q5H9R7 873 aaPredicted RBP4.87□□□□□ -1.63
SSR3-209ENST00000498205 PRAMEF19Q5SWL8 479 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 SLC9C2Q5TAH2 1124 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 CES5AQ6NT32 575 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 ARMCX5Q6P1M9 558 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 SLC22A25Q6T423 547 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 OLFM4Q6UX06 510 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 CLEC4GQ6UXB4 293 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 TOM1L2Q6ZVM7 507 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 BHLHA9Q7RTU4 235 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 KIAA2013Q8IYS2 634 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 SCCPDHQ8NBX0 429 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 GJC3Q8NFK1 279 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 ADAMTS15Q8TE58 950 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 HTRA1Q92743 480 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 FBXL8Q96CD0 374 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 PPP1R13BQ96KQ4 1090 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 DUX5Q96PT3 197 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 MXRA8Q9BRK3 442 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 UBXN6Q9BZV1 441 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 XPO4Q9C0E2 1151 aaKnown RBP4.87□□□□□ -1.63
SSR3-209ENST00000498205 CYSLTR2Q9NS75 346 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 RBM28Q9NW13 759 aaKnown RBP4.87□□□□□ -1.63
SSR3-209ENST00000498205 AATFQ9NY61 560 aaKnown RBP eCLIP4.87□□□□□ -1.63
SSR3-209ENST00000498205 KCND2Q9NZV8 630 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 NRBP1Q9UHY1 535 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 A3GALT2U3KPV4 340 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 ECM29Q5VYK3 1845 aa4.87□□□□□ -1.63
SSR3-209ENST00000498205 AHDC1Q5TGY3 1603 aaPredicted RBP4.86□□□□□ -1.63
SSR3-209ENST00000498205 A0A1B0GVL5 298 aa4.86□□□□□ -1.63
SSR3-209ENST00000498205 DYTNA2CJ06 578 aa4.86□□□□□ -1.63
SSR3-209ENST00000498205 DENND3A2RUS2 1198 aa4.86□□□□□ -1.63
SSR3-209ENST00000498205 HSPB2A8KAH6 182 aa4.86□□□□□ -1.63
SSR3-209ENST00000498205 WDHD1O75717 1129 aaPredicted RBP4.86□□□□□ -1.63
SSR3-209ENST00000498205 PAPSS2O95340 614 aaPredicted RBP4.86□□□□□ -1.63
SSR3-209ENST00000498205 CH25HO95992 272 aa4.86□□□□□ -1.63
SSR3-209ENST00000498205 MT-CYBP00156 380 aaPredicted RBP4.86□□□□□ -1.63
SSR3-209ENST00000498205 GALTP07902 379 aa4.86□□□□□ -1.63
SSR3-209ENST00000498205 TNFRSF8P28908 595 aa4.86□□□□□ -1.63
SSR3-209ENST00000498205 PPP1R2P41236 205 aa4.86□□□□□ -1.63
SSR3-209ENST00000498205 EIF5P55010 431 aaKnown RBP4.86□□□□□ -1.63
SSR3-209ENST00000498205 UBASH3AP57075 661 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms