RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 LUC7L2Q9Y383 392 aaKnown RBP16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 ADGRG1Q9Y653 693 aa16.63■□□□□ 0.25
TRAPPC3-207ENST00000497251 A0A087X0T9 212 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 A0A0U1RQS6 177 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 LOC101059948A0A1B0GTJ6 334 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 FADS2P1A8MWK0 482 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 KMOO15229 486 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 NKX2-8O15522 239 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 SNX2O60749 519 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 VIPP01282 170 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 NTRK1P04629 796 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 H2AFZP0C0S5 128 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 FAM228BP0C875 321 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 PPIDQ08752 370 aaKnown RBP16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 ABRAXAS1Q6UWZ7 409 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 TMEM26Q6ZUK4 368 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 H2AFVQ71UI9 128 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 TRAM1L1Q8N609 369 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 DTX3LQ8TDB6 740 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 STARD8Q92502 1023 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 SEC14L1Q92503 715 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 PLEKHG4BQ96PX9 1271 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 TIMM29Q9BSF4 260 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 SPATA16Q9BXB7 569 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 RAB33BQ9H082 229 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 POT1Q9NUX5 634 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 SIDT1Q9NXL6 827 aaKnown RBP16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 DTLQ9NZJ0 730 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 ATXN10Q9UBB4 475 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 EPHA6Q9UF33 1036 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 KCND3Q9UK17 655 aa16.62■□□□□ 0.25
TRAPPC3-207ENST00000497251 COL12A1Q99715 3063 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 UBXN7O94888 489 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 JCHAINP01591 159 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 MT-ND3P03897 115 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 TPM3P06753 285 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZFXP17010 805 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZNF8P17098 575 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 VCLP18206 1134 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 CD86P42081 329 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 FOXK1P85037 733 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 GBE1Q04446 702 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 PDK1Q15118 436 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 COLEC12Q5KU26 742 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 AGAP9Q5VTM2 703 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZDHHC20Q5W0Z9 365 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 CCDC70Q6NSX1 233 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 TIPARPQ7Z3E1 657 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 TMC3Q7Z5M5 1100 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 BPHLQ86WA6 291 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 TRIM48Q8IWZ4 208 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 PQLC3Q8N755 202 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 CTNNBL1Q8WYA6 563 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 GLYATL1Q969I3 302 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZDHHC12Q96GR4 267 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 FCRL4Q96PJ5 515 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 RNF157Q96PX1 679 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 SMIM14Q96QK8 99 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 KLC4Q9NSK0 619 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 CTTNBP2NLQ9P2B4 639 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 PRKAB1Q9Y478 270 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 RPS6KL1Q9Y6S9 549 aa16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 SPTBN1Q01082 2364 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-207ENST00000497251 GOLGA6L3A6NEY3 463 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 MMP2P08253 660 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 AMD1P17707 334 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 KDELR1P24390 212 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 HNRNPH3P31942 346 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 SRSF1Q07955 248 aaKnown RBP eCLIP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 UBAP2LQ14157 1087 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 LACTB2Q53H82 288 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 C6orf15Q6UXA7 325 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 PRSS42Q7Z5A4 293 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 NT5DC3Q86UY8 548 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 LRRTM4Q86VH4 590 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 BRSK1Q8TDC3 778 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 IMP4Q96G21 291 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 CTRCQ99895 268 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 ULBP3Q9BZM4 244 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 EPN3Q9H201 632 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 OR2AG1Q9H205 316 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZNF768Q9H5H4 540 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 PRDM8Q9NQV8 689 aa16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 PCYT1BQ9Y5K3 369 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 SPTAN1Q13813 2472 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-207ENST00000497251 USP9YO00507 2555 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 PRR19A6NJB7 356 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 MKRN2OSH3BPM6 223 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 PPP1R12AO14974 1030 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 CCNYL3P0C7X3 344 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZNF7P17097 686 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 IDSP22304 550 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 MAPK9P45984 424 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 SLC10A2Q12908 348 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 KLRB1Q12918 225 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 INSCQ1MX18 579 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms