RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 GON7Q9BXV9 100 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TINAGL1Q9GZM7 467 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC22A4Q9H015 551 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 RNF41Q9H4P4 317 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ERVMER34-1Q9H9K5 563 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZMAT3Q9HA38 289 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 S100A14Q9HCY8 104 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GJB4Q9NTQ9 266 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 UFSP2Q9NUQ7 469 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SOHLH2Q9NX45 425 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SPASTQ9UBP0 616 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 NARFQ9UHQ1 456 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CAMK2AQ9UQM7 478 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 HPSEQ9Y251 543 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KLHL20Q9Y2M5 609 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 MRPS7Q9Y2R9 242 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TDRKHQ9Y2W6 561 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CLDN16Q9Y5I7 305 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DHX57Q6P158 1386 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SPATA31A3Q5VYP0 1347 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 NRCAMQ92823 1304 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF521Q96K83 1311 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 MFSD2BA6NFX1 497 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 HMX3A6NHT5 357 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF233A6NK53 670 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNJ18B7U540 433 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PTGES3LE9PB15 166 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 F8W036 122 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SNAP23O00161 211 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 O00370 1275 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 POLRMTO00411 1230 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SMAD9O15198 467 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TM9SF1O15321 606 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 B4GAT1O43505 415 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNQ3O43525 872 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SCO2O43819 266 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 B3GALT2O43825 422 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 MAGEC1O60732 1142 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GAS7O60861 476 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 VPS4BO75351 444 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CTAG2O75638 210 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PNPP00491 289 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GJB1P08034 283 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CYP21A2P08686 494 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 HNRNPA1P09651 372 aaKnown RBP eCLIP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DBTP11182 482 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ACADMP11310 421 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 NCF1P14598 390 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PKMP14618 531 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF12P17014 697 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TNNI3P19429 210 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TYMPP19971 482 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PTGS1P23219 599 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SERPINB1P30740 379 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GTF2H1P32780 548 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 HMGCLP35914 325 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 EIF2DP41214 584 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC1A4P43007 532 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KIR3DL2P43630 455 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GABRB2P47870 512 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNC1P48547 511 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PTDSS1P48651 473 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PIK3CGP48736 1102 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 HSPA7P48741 367 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNQ1P51787 676 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CLCN5P51795 746 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CLCNKAP51800 687 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SUCLG1P53597 346 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GAD2Q05329 585 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DBPQ10586 325 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 IL24Q13007 206 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GPM6BQ13491 265 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNJ12Q14500 433 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 NFIXQ14938 502 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 R3HDM1Q15032 1099 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ANGPT1Q15389 498 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNJ8Q15842 424 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 UAP1L1Q3KQV9 507 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC9C2Q5TAH2 1124 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PXDC1Q5TGL8 231 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 STRIP1Q5VSL9 837 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM109BQ6ICB4 259 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ACAD10Q6JQN1 1059 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TIGD7Q6NT04 549 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 NIPAL1Q6NVV3 410 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 FUT10Q6P4F1 479 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TTC33Q6PID6 262 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 METAP1DQ6UB28 335 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SZRD1Q7Z422 152 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DCXRQ7Z4W1 244 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DDX53Q86TM3 631 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TLK2Q86UE8 772 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 RALGPS2Q86X27 583 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CHERPQ8IWX8 916 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TIGD4Q8IY51 512 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF781Q8N8C0 355 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GLIS1Q8NBF1 620 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CMASQ8NFW8 434 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 OR5T1Q8NG75 326 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 OR13C2Q8NGS9 318 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms