RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 VEGFDO43915 354 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 MSH3P20585 1137 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 TMEM115Q12893 351 aaPredicted RBP21.53■■□□□ 1.04
C9orf3-222ENST00000496567 SEMA3AQ14563 771 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 SLC22A18ASQ8N1D0 253 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 CAVIN3Q969G5 261 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 ARRDC1-AS1Q9H2J1 176 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 ARFGAP3Q9NP61 516 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 NSMCE4AQ9NXX6 385 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 GMEB2Q9UKD1 530 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 OAS3Q9Y6K5 1087 aaKnown RBP21.53■■□□□ 1.04
C9orf3-222ENST00000496567 PLXNB3Q9ULL4 1909 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 IGLV3-16A0A075B6K0 115 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 GPR89AB7ZAQ6 455 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 TNFRSF10CO14798 259 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 ERLIN1O75477 346 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 NDUFS3O75489 264 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 RETP07949 1114 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 GPR89BP0CG08 455 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 MPLP40238 635 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 NXPH1P58417 271 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 GTF2H3Q13889 308 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 TYSND1Q2T9J0 566 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 TEDDM1Q5T9Z0 273 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 ENPP7Q6UWV6 458 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 LAYNQ6UX15 382 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 KIAA0408Q6ZU52 694 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 RBFAQ8N0V3 343 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 OR56A4Q8NGH8 313 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 FBF1Q8TES7 1133 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 FAM86C1Q9NVL1 165 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 INTS10Q9NVR2 710 aaKnown RBP21.53■■□□□ 1.04
C9orf3-222ENST00000496567 FBXO5Q9UKT4 447 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 SLC17A4Q9Y2C5 497 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 ANKRD6Q9Y2G4 727 aa21.53■■□□□ 1.04
C9orf3-222ENST00000496567 A0A1B0GVT2 93 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 TMEM202A6NGA9 273 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 RIPK2O43353 540 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 MTX2O75431 263 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 CDK14O94921 469 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 CFIP05156 583 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 ZNF7P17097 686 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-222ENST00000496567 NSG1P42857 185 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 SLC1A2P43004 574 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 BRD3Q15059 726 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 SLC23A3Q6PIS1 610 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 DOK6Q6PKX4 331 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 PACS1Q6VY07 963 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 ADGRG6Q86SQ4 1221 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 LDB1Q86U70 411 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-222ENST00000496567 FUT8Q9BYC5 575 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 OR2AG1Q9H205 316 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 KLQ9UEF7 1012 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 SLC6A14Q9UN76 642 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 TMEM98Q9Y2Y6 226 aa21.52■■□□□ 1.04
C9orf3-222ENST00000496567 A0A087WUV0 522 aaPredicted RBP21.51■■□□□ 1.03
C9orf3-222ENST00000496567 FAM159BA6NKW6 160 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 LMNAP02545 664 aaKnown RBP21.51■■□□□ 1.03
C9orf3-222ENST00000496567 CEACAM5P06731 702 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 ABHD2P08910 425 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 CTBP1Q13363 440 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 KHDC1Q4VXA5 237 aaKnown RBP21.51■■□□□ 1.03
C9orf3-222ENST00000496567 TPRG1LQ5T0D9 272 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 PARGQ86W56 976 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 DENND6AQ8IWF6 608 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 C2CD4AQ8NCU7 369 aaPredicted RBP21.51■■□□□ 1.03
C9orf3-222ENST00000496567 CYTH2Q99418 400 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 RMI1Q9H9A7 625 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 ATXN10Q9UBB4 475 aa21.51■■□□□ 1.03
C9orf3-222ENST00000496567 CCDC151A5D8V7 595 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 ATP1B2P14415 290 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-222ENST00000496567 NAB1Q13506 487 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 FZD2Q14332 565 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 KBTBD12Q3ZCT8 623 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 TRIM61Q5EBN2 209 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 ZNF648Q5T619 568 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-222ENST00000496567 GALNT7Q86SF2 657 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 SLC26A11Q86WA9 606 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 SPATS2Q86XZ4 545 aaKnown RBP21.5■■□□□ 1.03
C9orf3-222ENST00000496567 UBLCP1Q8WVY7 318 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-222ENST00000496567 ZNF514Q96K75 400 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-222ENST00000496567 BOCQ9BWV1 1114 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 NUSAP1Q9BXS6 441 aaKnown RBP21.5■■□□□ 1.03
C9orf3-222ENST00000496567 ACSS3Q9H6R3 686 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 CAPN10Q9HC96 672 aa21.5■■□□□ 1.03
C9orf3-222ENST00000496567 PRSS38A1L453 326 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 F8W8V4 182 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 NUAK1O60285 661 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 S1PR4O95977 384 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 IVLP07476 585 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 ZNF8P17098 575 aaPredicted RBP21.49■■□□□ 1.03
C9orf3-222ENST00000496567 LEPRP48357 1165 aaKnown RBP21.49■■□□□ 1.03
C9orf3-222ENST00000496567 POLD2P49005 469 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 SRP54P61011 504 aaKnown RBP21.49■■□□□ 1.03
C9orf3-222ENST00000496567 B4GALNT1Q00973 533 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 PLA2G2CQ5R387 149 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 LRRC6Q86X45 466 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 CTAGE3PQ8IX95 158 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 PNPLA1Q8N8W4 532 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 SCARF2Q96GP6 870 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms