RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	SH3KBP1	Q96B97	665 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	SCRN2	Q96FV2	425 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	TCTN2	Q96GX1	697 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	COX14	Q96I36	57 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	MCCC1	Q96RQ3	725 aa	Predicted RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	MGME1	Q9BQP7	344 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	HERPUD2	Q9BSE4	406 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	TRIM7	Q9C029	511 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	NT5M	Q9NPB1	228 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	ETNK2	Q9NVF9	386 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	ERRFI1	Q9UJM3	462 aa	Predicted RBP	7.74	□□□□□ -1.17
NVL-223	ENST00000496393	TTLL3	Q9Y4R7	772 aa		7.74	□□□□□ -1.17
NVL-223	ENST00000496393	CELSR2	Q9HCU4	2923 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	LILRA5	A6NI73	299 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	FADS2P1	A8MWK0	482 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	SPAG6	O75602	509 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	UBXN7	O94888	489 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	CCNYL3	P0C7X3	344 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	DES	P17661	470 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	AMPD1	P23109	780 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	MIP	P30301	263 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	HSPA9	P38646	679 aa	Known RBP	7.73	□□□□□ -1.17
NVL-223	ENST00000496393	MMP13	P45452	471 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	STC1	P52823	247 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	EPHB1	P54762	984 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	PPP1CA	P62136	330 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	UBE2I	P63279	158 aa	Known RBP	7.73	□□□□□ -1.17
NVL-223	ENST00000496393	PTS	Q03393	145 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	ITK	Q08881	620 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	DPYS	Q14117	519 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	KCNAB1	Q14722	419 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	SMTNL2	Q2TAL5	461 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	LINC01559	Q495D7	138 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	TCP11X2	Q5H9J9	407 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	ERMARD	Q5T6L9	678 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	CACHD1	Q5VU97	1274 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	IRGC	Q6NXR0	463 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	LYSMD3	Q7Z3D4	306 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	PHYKPL	Q8IUZ5	450 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	APLF	Q8IW19	511 aa	Predicted RBP	7.73	□□□□□ -1.17
NVL-223	ENST00000496393	TRIM48	Q8IWZ4	208 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	TTC30B	Q8N4P2	665 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	ATPAF2	Q8N5M1	289 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	ARFGAP1	Q8N6T3	406 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393		Q8NA96	180 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	EXD1	Q8NHP7	514 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	ZNF599	Q96NL3	588 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	PLEKHG4B	Q96PX9	1271 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	7.73	□□□□□ -1.17
NVL-223	ENST00000496393	BRD8	Q9H0E9	1235 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	ZNF768	Q9H5H4	540 aa	Known RBP	7.73	□□□□□ -1.17
NVL-223	ENST00000496393	LHX9	Q9NQ69	397 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	ACSS2	Q9NR19	701 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	KLC4	Q9NSK0	619 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	TAS2R14	Q9NYV8	317 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	CWC15	Q9P013	229 aa	Known RBP	7.73	□□□□□ -1.17
NVL-223	ENST00000496393	PADI1	Q9ULC6	663 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	CNOT6	Q9ULM6	557 aa	Known RBP	7.73	□□□□□ -1.17
NVL-223	ENST00000496393	DNAJC16	Q9Y2G8	782 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	PRRC2C	Q9Y520	2896 aa	Known RBP	7.73	□□□□□ -1.17
NVL-223	ENST00000496393	CRYBG3	Q68DQ2	2970 aa		7.73	□□□□□ -1.17
NVL-223	ENST00000496393	KIR2DS5	A0A0G2JLQ3	304 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393		A0A0G2JNG1	304 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393		A0A0J9YYE9	177 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393		A6NL46	340 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	PDZK1P1	A8MUH7	402 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	KIR2DS3	K7RE56	304 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	GRID2	O43424	1007 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	PRPSAP2	O60256	369 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	MAFK	O60675	156 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	CLDN7	O95471	211 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	DDAH2	O95865	285 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	VIP	P01282	170 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	TRBC1	P01850	177 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	SLC4A1	P02730	911 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	C9	P02748	559 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	SLC2A4	P14672	509 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	ZNF8	P17098	575 aa	Predicted RBP	7.72	□□□□□ -1.17
NVL-223	ENST00000496393	PTGIR	P43119	386 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	DSC2	Q02487	901 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	TUBB3	Q13509	450 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	RAPSN	Q13702	412 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	IHH	Q14623	411 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	IL11RA	Q14626	422 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	KIR2DS5	Q14953	304 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	NR6A1	Q15406	480 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	UGT8	Q16880	541 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	TDRD12	Q587J7	1177 aa	Known RBP	7.72	□□□□□ -1.17
NVL-223	ENST00000496393	MARC1	Q5VT66	337 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	FAM69B	Q5VUD6	431 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	ALS2CL	Q60I27	953 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	PWWP2B	Q6NUJ5	590 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	JMJD6	Q6NYC1	403 aa	Predicted RBP	7.72	□□□□□ -1.17
NVL-223	ENST00000496393	CERS6	Q6ZMG9	384 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	TMEM26	Q6ZUK4	368 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms