RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZNF106Q9H2Y7 1883 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 MAGEB16A2A368 324 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 FAM187AA6NFU0 413 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 SDR42E2A6NKP2 422 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 CFAP99D6REC4 459 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 SMAPO00193 183 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 GAPDHSO14556 408 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 KMOO15229 486 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 GPR39O43194 453 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 GRID2O43424 1007 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 TNFSF14O43557 240 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 DNAJC6O75061 913 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 CBFA2T3O75081 653 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 AVILO75366 819 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 MTX2O75431 263 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 TMEM63AO94886 807 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 ZNF8P17098 575 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 PAMP19021 973 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 PPARGP37231 505 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 RPIAP49247 311 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 DUSP3P51452 185 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 SIM1P81133 766 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 XIAPP98170 497 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 LRP8Q14114 963 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 MORF4L2Q15014 288 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 PYCR3Q53H96 274 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 PPM1JQ5JR12 505 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 C6orf132Q5T0Z8 1188 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 GPRC6AQ5T6X5 926 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 RNASEH2BQ5TBB1 312 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 ARMC3Q5W041 872 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 KCTD16Q68DU8 428 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 AFTPHQ6ULP2 937 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 LRRTM4Q86VH4 590 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 TRAPPC5Q8IUR0 188 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 NAT8LQ8N9F0 302 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 BBOF1Q8ND07 529 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 FAM46DQ8NEK8 389 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 DDHD1Q8NEL9 900 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 HEXDCQ8WVB3 486 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 HDAC10Q969S8 669 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 TRIM51Q9BSJ1 452 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 DPEP2Q9H4A9 486 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 FAM96AQ9H5X1 160 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 MRM3Q9HC36 420 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 SYBUQ9NX95 663 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 GPR34Q9UPC5 381 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 UTP11Q9Y3A2 253 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 PRKAB1Q9Y478 270 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 DCHS1Q96JQ0 3298 aa11.95□□□□□ -0.5
CSNK1E-213ENST00000495232 TRIM38O00635 465 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 FUCA1P04066 466 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 CELA2BP08218 269 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 VCLP18206 1134 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 ACTR1BP42025 376 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 ACTR1AP61163 376 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 CTBSQ01459 385 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 CALCOCO2Q13137 446 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 BIRC2Q13490 618 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 NR0B2Q15466 257 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 INSCQ1MX18 579 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 FASTKD1Q53R41 847 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 CCDC157Q569K6 752 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 DNAJC21Q5F1R6 531 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 LYPLAL1Q5VWZ2 237 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 SLC30A9Q6PML9 568 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 CRTC3Q6UUV7 619 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 ZNF534Q76KX8 674 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 ZNF572Q7Z3I7 529 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 CAND1Q86VP6 1230 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 SERPINA9Q86WD7 417 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 NXPE1Q8N323 547 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 OTUD6BQ8N6M0 293 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 FAM181AQ8N9Y4 354 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 OR13J1Q8NGT2 312 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 OR4L1Q8NH43 312 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 BAHD1Q8TBE0 780 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 GPBAR1Q8TDU6 330 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 ZNF514Q96K75 400 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 APOLD1Q96LR9 279 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 COPS8Q99627 209 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 KIFC1Q9BW19 673 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 RAB17Q9H0T7 212 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 SIRPGQ9P1W8 387 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 GULP1Q9UBP9 304 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 SLC2A6Q9UGQ3 507 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 TMPRSS11EQ9UL52 423 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 SOX13Q9UN79 622 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 MRFAP1Q9Y605 127 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 MAD1L1Q9Y6D9 718 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 SPTBN4Q9H254 2564 aa11.94□□□□□ -0.5
CSNK1E-213ENST00000495232 COL5A1P20908 1838 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-213ENST00000495232 SPAARA0A1B0GVQ0 90 aa11.93□□□□□ -0.5
CSNK1E-213ENST00000495232 CCDC162PA2VCL2 907 aa11.93□□□□□ -0.5
CSNK1E-213ENST00000495232 B4DGG1 531 aa11.93□□□□□ -0.5
CSNK1E-213ENST00000495232 GIPC1O14908 333 aa11.93□□□□□ -0.5
CSNK1E-213ENST00000495232 RAD51CO43502 376 aa11.93□□□□□ -0.5
CSNK1E-213ENST00000495232 GOT2P00505 430 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-213ENST00000495232 GIMD1P0DJR0 217 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms