RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PFDN6O15212 129 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 IHHQ14623 411 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 ACAP2Q15057 778 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 PERM1Q5SV97 790 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 ANKRD34AQ69YU3 496 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 TXNDC8Q6A555 127 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 PM20D1Q6GTS8 502 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 FAM45BPQ6NSW5 357 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 RNF180Q86T96 592 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 DHRSXQ8N5I4 330 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 METTL25Q8N6Q8 603 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
GPC1-209ENST00000495100 OR2T34Q8NGX1 318 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 OR2T3Q8NH03 318 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 FAM45AQ8TCE6 357 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 GTF3C2Q8WUA4 911 aaPredicted RBP13.35□□□□□ -0.27
GPC1-209ENST00000495100 RUBCNLQ9H714 662 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 SMURF2Q9HAU4 748 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 PRDM8Q9NQV8 689 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 FARSBQ9NSD9 589 aaKnown RBP13.35□□□□□ -0.27
GPC1-209ENST00000495100 MKS1Q9NXB0 559 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 RBBP6Q7Z6E9 1792 aaKnown RBP13.35□□□□□ -0.27
GPC1-209ENST00000495100 WDR87Q6ZQQ6 2873 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 NINQ8N4C6 2090 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 SLC22A3O75751 556 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 BCAS2O75934 225 aaPredicted RBP13.34□□□□□ -0.27
GPC1-209ENST00000495100 LDLRP01130 860 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 TFAP2AP05549 437 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 IL7RP16871 459 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 IMPDH1P20839 514 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 ELK4P28324 431 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 GLYATQ6IB77 296 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 CLEC14AQ86T13 490 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 ITFG1Q8TB96 612 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.34□□□□□ -0.27
GPC1-209ENST00000495100 MED8Q96G25 268 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 TPD52L3Q96J77 140 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 SMAD5Q99717 465 aaKnown RBP13.34□□□□□ -0.27
GPC1-209ENST00000495100 NOL6Q9H6R4 1146 aaKnown RBP13.34□□□□□ -0.27
GPC1-209ENST00000495100 SYTL2Q9HCH5 934 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 RASSF1Q9NS23 344 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 ATG2BQ96BY7 2078 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 C2orf78A6NCI8 922 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 RPP40O75818 363 aaKnown RBP13.34□□□□□ -0.27
GPC1-209ENST00000495100 B3GALT4O96024 378 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 RHOQP17081 205 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 FUT4P22083 530 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 NDST2P52849 883 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 FCGRTP55899 365 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 SEMA3BQ13214 749 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 GTDC1Q4AE62 458 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 CST9Q5W186 159 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 ZNF549Q6P9A3 640 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 GPRIN3Q6ZVF9 776 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 LYSMD3Q7Z3D4 306 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 GPR156Q8NFN8 814 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 EZH1Q92800 747 aaPredicted RBP13.34□□□□□ -0.27
GPC1-209ENST00000495100 IL12RB2Q99665 862 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 FAM192AQ9GZU8 254 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 IPPKQ9H8X2 491 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 SEPT3Q9UH03 358 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 EBF1Q9UH73 591 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 ARPC2O15144 300 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 AOC2O75106 756 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 SLC25A14O95258 325 aaPredicted RBP13.34□□□□□ -0.27
GPC1-209ENST00000495100 G6PDP11413 515 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 MYCLP1P12525 358 aaPredicted RBP13.34□□□□□ -0.27
GPC1-209ENST00000495100 HALP42357 657 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 PPP3CCP48454 512 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 GSK3BP49841 420 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 SGSHP51688 502 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 HERVK_113P63132 956 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 IL5RAQ01344 420 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 CHRNB3Q05901 458 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 LRRC74AQ0VAA2 488 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 FAM174BQ3ZCQ3 159 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 ZNF697Q5TEC3 545 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 UGT2A3Q6UWM9 527 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 TMEM26Q6ZUK4 368 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 LRRC58Q96CX6 371 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 ERVK-6Q9BXR3 956 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 TRIM15Q9C019 465 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 SMOC2Q9H3U7 446 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 ETAA1Q9NY74 926 aa13.34□□□□□ -0.27
GPC1-209ENST00000495100 A0A1W2PPW3 197 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 TRMUO75648 421 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 PRAMEF12O95522 483 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 CYBBP04839 570 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ZNF37AP17032 561 aaPredicted RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 XPAP23025 273 aaPredicted RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 ADARP55265 1226 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 PWP1Q13610 501 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 SLC15A3Q8IY34 581 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 CPSF7Q8N684 471 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 KRTCAP2Q8N6L1 136 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ADCY4Q8NFM4 1077 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 GPR78Q96P69 363 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 HAPLN3Q96S86 360 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 TRIM62Q9BVG3 475 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 GSTO2Q9H4Y5 243 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms