RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 PRAMEP78395 509 aa11□□□□□ -0.65
APTX-230ENST00000494649 CTBSQ01459 385 aa11□□□□□ -0.65
APTX-230ENST00000494649 TMEM115Q12893 351 aaPredicted RBP11□□□□□ -0.65
APTX-230ENST00000494649 SLC14A1Q13336 389 aa11□□□□□ -0.65
APTX-230ENST00000494649 ITGA9Q13797 1035 aa11□□□□□ -0.65
APTX-230ENST00000494649 SEPT7Q16181 437 aaKnown RBP11□□□□□ -0.65
APTX-230ENST00000494649 WHAMMP3Q1A5X7 153 aa11□□□□□ -0.65
APTX-230ENST00000494649 SKIDA1Q1XH10 827 aa11□□□□□ -0.65
APTX-230ENST00000494649 PYCR3Q53H96 274 aa11□□□□□ -0.65
APTX-230ENST00000494649 ZDHHC20Q5W0Z9 365 aa11□□□□□ -0.65
APTX-230ENST00000494649 PATE1Q8WXA2 126 aa11□□□□□ -0.65
APTX-230ENST00000494649 SGF29Q96ES7 293 aa11□□□□□ -0.65
APTX-230ENST00000494649 SNF8Q96H20 258 aa11□□□□□ -0.65
APTX-230ENST00000494649 RUNDC3BQ96NL0 473 aa11□□□□□ -0.65
APTX-230ENST00000494649 IL22Q9GZX6 179 aa11□□□□□ -0.65
APTX-230ENST00000494649 DPEP2Q9H4A9 486 aa11□□□□□ -0.65
APTX-230ENST00000494649 OSGEPL1Q9H4B0 414 aa11□□□□□ -0.65
APTX-230ENST00000494649 TRIM39Q9HCM9 518 aa11□□□□□ -0.65
APTX-230ENST00000494649 DLL3Q9NYJ7 618 aa11□□□□□ -0.65
APTX-230ENST00000494649 NFKBIL1Q9UBC1 381 aaPredicted RBP11□□□□□ -0.65
APTX-230ENST00000494649 GULP1Q9UBP9 304 aa11□□□□□ -0.65
APTX-230ENST00000494649 APPL1Q9UKG1 709 aa11□□□□□ -0.65
APTX-230ENST00000494649 DGKBQ9Y6T7 804 aa11□□□□□ -0.65
APTX-230ENST00000494649 GRID2O43424 1007 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SNX2O60749 519 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SEC31AO94979 1220 aaKnown RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 VAPBO95292 243 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ANXA6P08133 673 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 HOXC4P09017 264 aaPredicted RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 TEAD1P28347 426 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ACTR1BP42025 376 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 NPY2RP49146 381 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 CLDN6P56747 220 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ACTR1AP61163 376 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SIM1P81133 766 aaPredicted RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 CDK16Q00536 496 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 DHX9Q08211 1270 aaKnown RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 SEMA3AQ14563 771 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 BBS9Q3SYG4 887 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 C8orf74Q6P047 294 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SNX20Q7Z614 316 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 PIP4P1Q86T03 277 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SERPINA9Q86WD7 417 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ZNF547Q8IVP9 402 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 RAVER1Q8IY67 606 aaKnown RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 CLDN19Q8N6F1 224 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 OTUD6BQ8N6M0 293 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 RASGEF1AQ8N9B8 481 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 LRRN4CLQ8ND94 238 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 FAM46DQ8NEK8 389 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ZNF669Q96BR6 464 aaPredicted RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 CNDP2Q96KP4 475 aaKnown RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 VPS35Q96QK1 796 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 OR2M4Q96R27 311 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 CARD6Q9BX69 1037 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SAMD15Q9P1V8 674 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SLC23A2Q9UGH3 650 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ANAPC5Q9UJX4 755 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ARID1BQ8NFD5 2236 aaPredicted RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 NEMP2A6NFY4 417 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 TNFRSF10CO14798 259 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 TP73O15350 636 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 YKT6O15498 198 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 NUAK1O60285 661 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 CBFA2T3O75081 653 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 KCNK5O95279 499 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 MSH3P20585 1137 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 B4GALNT1Q00973 533 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ELOCQ15369 112 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 TRIP6Q15654 476 aaKnown RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 INSCQ1MX18 579 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 PPM1JQ5JR12 505 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 HIBCHQ6NVY1 386 aaPredicted RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 DBX2Q6ZNG2 339 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SYDE1Q6ZW31 735 aaPredicted RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 MAATS1Q7Z4T9 603 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 NRROSQ86YC3 692 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 UNC5BQ8IZJ1 945 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 FCRL3Q96P31 734 aaPredicted RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 RANBP9Q96S59 729 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 ERP44Q9BS26 406 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 RTKNQ9BST9 563 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SLC32A1Q9H598 525 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 SPATS2LQ9NUQ6 558 aaKnown RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 MARCH4Q9P2E8 410 aaPredicted RBP10.99□□□□□ -0.65
APTX-230ENST00000494649 FTSJ1Q9UET6 329 aa10.99□□□□□ -0.65
APTX-230ENST00000494649 GOLGA4Q13439 2230 aaKnown RBP10.98□□□□□ -0.65
APTX-230ENST00000494649 CTAGE15A4D2H0 777 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 SDR42E2A6NKP2 422 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 OR1I1O60431 355 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 LDOC1O95751 146 aaPredicted RBP10.98□□□□□ -0.65
APTX-230ENST00000494649 EML2O95834 649 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 IVLP07476 585 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 CTAGE8P0CG41 777 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 ARNTP27540 789 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 RPL10P27635 214 aaKnown RBP10.98□□□□□ -0.65
APTX-230ENST00000494649 DAB2P98082 770 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 ILF3Q12906 894 aaKnown RBP eCLIP10.98□□□□□ -0.65
APTX-230ENST00000494649 GTF2H3Q13889 308 aa10.98□□□□□ -0.65
APTX-230ENST00000494649 PDPK2PQ6A1A2 396 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms