RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FAM83DQ9H4H8 585 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 KLC4Q9NSK0 619 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 RCOR3Q9P2K3 495 aaPredicted RBP17.42■□□□□ 0.38
NUP50-218ENST00000493456 LIMA1Q9UHB6 759 aaKnown RBP17.42■□□□□ 0.38
NUP50-218ENST00000493456 AMACRQ9UHK6 382 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 MYO6Q9UM54 1294 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 CHKBQ9Y259 395 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 MAP4K5Q9Y4K4 846 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 PCDHGA9Q9Y5G4 932 aaKnown RBP17.42■□□□□ 0.38
NUP50-218ENST00000493456 ADGRG1Q9Y653 693 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 C1orf232A0A0U1RR37 186 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 DNAJB5O75953 348 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 MTA2O94776 668 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 SORBS2O94875 1100 aaKnown RBP17.41■□□□□ 0.38
NUP50-218ENST00000493456 DDAH2O95865 285 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 CCHCR1Q8TD31 782 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 KLHL6Q8WZ60 621 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 RNF31Q96EP0 1072 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 ELMO2Q96JJ3 720 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 GPR87Q9BY21 358 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 TRIM55Q9BYV6 548 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 ACTL8Q9H568 366 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 MRPL47Q9HD33 250 aaKnown RBP17.41■□□□□ 0.38
NUP50-218ENST00000493456 POT1Q9NUX5 634 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 FANCLQ9NW38 375 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 SLC30A1Q9Y6M5 507 aa17.41■□□□□ 0.38
NUP50-218ENST00000493456 SEMA7AO75326 666 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 GZMAP12544 262 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 ZNF8P17098 575 aaPredicted RBP17.4■□□□□ 0.38
NUP50-218ENST00000493456 LEPRP48357 1165 aaKnown RBP17.4■□□□□ 0.38
NUP50-218ENST00000493456 UGT8Q16880 541 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 ANKRD20A8PQ5CZ79 823 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 CACHD1Q5VU97 1274 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 TIGD7Q6NT04 549 aaPredicted RBP17.4■□□□□ 0.38
NUP50-218ENST00000493456 RBM12BQ8IXT5 1001 aaKnown RBP17.4■□□□□ 0.38
NUP50-218ENST00000493456 LPCAT1Q8NF37 534 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 TEKT4Q8WW24 435 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 MAML1Q92585 1016 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 ZNF653Q96CK0 615 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 TRIM11Q96F44 468 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 ZDHHC12Q96GR4 267 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 FCRL4Q96PJ5 515 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 SLC25A23Q9BV35 468 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 PCDH9Q9HC56 1237 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 PDE7BQ9NP56 450 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 SCHIP1Q9P0W5 487 aaPredicted RBP17.4■□□□□ 0.38
NUP50-218ENST00000493456 ATXN10Q9UBB4 475 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 EPHA6Q9UF33 1036 aa17.4■□□□□ 0.38
NUP50-218ENST00000493456 PRLP01236 227 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 FTLP02792 175 aaPredicted RBP17.39■□□□□ 0.37
NUP50-218ENST00000493456 RARAP10276 462 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 NELFEP18615 380 aaKnown RBP17.39■□□□□ 0.37
NUP50-218ENST00000493456 SLC19A1P41440 591 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 ZNF165P49910 485 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 DSC2Q02487 901 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 INSCQ1MX18 579 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 ZNF569Q5MCW4 686 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 PAPD7Q5XG87 772 aaKnown RBP17.39■□□□□ 0.37
NUP50-218ENST00000493456 SYVN1Q86TM6 617 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 FATE1Q969F0 183 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 RAB33BQ9H082 229 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 OR2AG1Q9H205 316 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 PCDH18Q9HCL0 1135 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 MLXIPLQ9NP71 852 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 ZNF624Q9P2J8 865 aaPredicted RBP17.39■□□□□ 0.37
NUP50-218ENST00000493456 TTLL3Q9Y4R7 772 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 PCDHGB7Q9Y5F8 929 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 DOPEY1Q5JWR5 2465 aa17.39■□□□□ 0.37
NUP50-218ENST00000493456 LRRC10BA6NIK2 292 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 CHUKO15111 745 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 KMOO15229 486 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 MATN3O15232 486 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 MYBL1P10243 752 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 VARSP26640 1264 aaKnown RBP17.38■□□□□ 0.37
NUP50-218ENST00000493456 PTPN4P29074 926 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 IHHQ14623 411 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 NADK2Q4G0N4 442 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 TDRD12Q587J7 1177 aaKnown RBP17.38■□□□□ 0.37
NUP50-218ENST00000493456 BPHLQ86WA6 291 aaPredicted RBP17.38■□□□□ 0.37
NUP50-218ENST00000493456 RSC1A1Q92681 617 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 TIMM29Q9BSF4 260 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 ZSCAN5AQ9BUG6 496 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 SLC29A3Q9BZD2 475 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 TRIM39Q9HCM9 518 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 ACSS2Q9NR19 701 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 RARRES3Q9UL19 164 aa17.38■□□□□ 0.37
NUP50-218ENST00000493456 A1L4Q6 167 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 PDZK1P1A8MUH7 402 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 KIF1CO43896 1103 aaKnown RBP17.37■□□□□ 0.37
NUP50-218ENST00000493456 MFSD11O43934 449 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 SLC25A14O95258 325 aaPredicted RBP17.37■□□□□ 0.37
NUP50-218ENST00000493456 RNF224P0DH78 156 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 TCF4P15884 667 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 DCDC1P59894 354 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 RPS15P62841 145 aaKnown RBP17.37■□□□□ 0.37
NUP50-218ENST00000493456 GALNT2Q10471 571 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 TUBB3Q13509 450 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 PIGHQ14442 188 aaPredicted RBP17.37■□□□□ 0.37
NUP50-218ENST00000493456 CPZQ66K79 652 aa17.37■□□□□ 0.37
NUP50-218ENST00000493456 PDPK2PQ6A1A2 396 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms