RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PCYT2Q99447 389 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 HIPK2Q9H2X6 1198 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 MAGIXQ9H6Y5 334 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 NKIRAS2Q9NYR9 191 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 SMARCAL1Q9NZC9 954 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 C1RLQ9NZP8 487 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 POLG2Q9UHN1 485 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 PADI1Q9ULC6 663 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 PLAGL1Q9UM63 463 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 EXO1Q9UQ84 846 aaKnown RBP3.91□□□□□ -1.78
CLK1-213ENST00000492793 AMDHD2Q9Y303 409 aa3.91□□□□□ -1.78
CLK1-213ENST00000492793 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.91□□□□□ -1.78
CLK1-213ENST00000492793 ARHGEF40Q8TER5 1519 aa3.9□□□□□ -1.78
CLK1-213ENST00000492793 SYNDIG1LA6NDD5 238 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 MID1O15344 667 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 IPO8O15397 1037 aaKnown RBP3.9□□□□□ -1.79
CLK1-213ENST00000492793 INSIG1O15503 277 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 KCNN4O15554 427 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 BCL10O95999 233 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 GH2P01242 217 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 ZNF12P17014 697 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 CORO1AP31146 461 aaKnown RBP3.9□□□□□ -1.79
CLK1-213ENST00000492793 APOBEC1P41238 236 aaKnown RBP3.9□□□□□ -1.79
CLK1-213ENST00000492793 CLDN20P56880 219 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 DSCR9P59020 149 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 ISL1P61371 349 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 ZNF155Q12901 538 aaPredicted RBP3.9□□□□□ -1.79
CLK1-213ENST00000492793 DECR1Q16698 335 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 IZUMO4Q1ZYL8 232 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 TMEM35AQ53FP2 167 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 ZDHHC20Q5W0Z9 365 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 DLK2Q6UY11 383 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 SFR1Q86XK3 245 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 SPATA2LQ8IUW3 424 aaPredicted RBP3.9□□□□□ -1.79
CLK1-213ENST00000492793 CHERPQ8IWX8 916 aaKnown RBP3.9□□□□□ -1.79
CLK1-213ENST00000492793 ODF3L1Q8IXM7 274 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 RNF113BQ8IZP6 322 aaKnown RBP3.9□□□□□ -1.79
CLK1-213ENST00000492793 NME8Q8N427 588 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 KCNH5Q8NCM2 988 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 SLC38A5Q8WUX1 472 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 SLC44A1Q8WWI5 657 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 ERP27Q96DN0 273 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 GCNAQ96QF7 691 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 ABHD1Q96SE0 405 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 CDRT15Q96T59 188 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 RTN4RQ9BZR6 473 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.9□□□□□ -1.795e-7■□□□□ 10.8
CLK1-213ENST00000492793 MCM9Q9NXL9 1143 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 PSD3Q9NYI0 1048 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 TAB2Q9NYJ8 693 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 ZNF224Q9NZL3 707 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 HACL1Q9UJ83 578 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 PADI3Q9ULW8 664 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 FAM169AQ9Y6X4 670 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 PTPRCP08575 1304 aa3.9□□□□□ -1.79
CLK1-213ENST00000492793 PDS5AQ29RF7 1337 aaKnown RBP3.9□□□□□ -1.79
CLK1-213ENST00000492793 LOC100509620A0A075B734 347 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 SAA2-SAA4A0A096LPE2 208 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 hCG_1809904A0A1W2PP81 198 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 A0A1W2PPE2 198 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 A0A1W2PR64 198 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 HNRNPCL2B2RXH8 293 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 FAM90A26D6RGX4 464 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 H0YIN7 160 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 TMEM189-UBE2V1I3L0A0 370 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 J3QR06 171 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 ZBTB11O95625 1053 aaPredicted RBP3.89□□□□□ -1.79
CLK1-213ENST00000492793 PMS2P2O95744 297 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 DNTTP04053 509 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 VPREB1P12018 145 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 POLR2CP19387 275 aaPredicted RBP3.89□□□□□ -1.79
CLK1-213ENST00000492793 NR2F2P24468 414 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 NMBRP28336 390 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 IL15P40933 162 aaPredicted RBP3.89□□□□□ -1.79
CLK1-213ENST00000492793 FASLGP48023 281 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 LIG4P49917 911 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 HSD17B4P51659 736 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 PNLIPRP2P54317 469 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 SEC61A1P61619 476 aaKnown RBP3.89□□□□□ -1.79
CLK1-213ENST00000492793 DLG1Q12959 904 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 UBE2V1Q13404 147 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 SNTA1Q13424 505 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 NFATC4Q14934 902 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 PCLAFQ15004 111 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 C15orf59Q2T9L4 293 aaPredicted RBP3.89□□□□□ -1.79
CLK1-213ENST00000492793 FAM98BQ52LJ0 330 aaKnown RBP3.89□□□□□ -1.79
CLK1-213ENST00000492793 PAPD4Q6PIY7 484 aaKnown RBP3.89□□□□□ -1.79
CLK1-213ENST00000492793 BRAT1Q6PJG6 821 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 SLC5A8Q8N695 610 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 LSMEM1Q8N8F7 131 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 POMGNT2Q8NAT1 580 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 ZNF114Q8NC26 417 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 SLC20A1Q8WUM9 679 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 PIGTQ969N2 578 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 LRRC59Q96AG4 307 aaKnown RBP3.89□□□□□ -1.79
CLK1-213ENST00000492793 PTERQ96BW5 349 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 CDCA5Q96FF9 252 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 LYZL4Q96KX0 146 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 HGH1Q9BTY7 390 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 LRMDAQ9H2I8 198 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms