RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CNTN5O94779 1100 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MED26O95402 600 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 APOC2P02655 101 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CALB1P05937 261 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MYL3P08590 195 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 HSD17B1P14061 328 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 EDN3P14138 238 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF30P17039 623 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ATP6V1B2P21281 511 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TGM2P21980 687 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 KDELR1P24390 212 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PTX3P26022 381 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TYK2P29597 1187 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FMO4P31512 558 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SHMT1P34896 483 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SHMT2P34897 504 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 RFC2P35250 354 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GGT5P36269 586 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MAGEA11P43364 429 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ALDH3A2P51648 485 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 UGT2B15P54855 530 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 VBP1P61758 197 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 RPL7AP62424 266 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DYNLT1P63172 113 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NOMO3P69849 1222 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NKX3-2P78367 333 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ROR1Q01973 937 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 EMX1Q04741 257 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FAPQ12884 760 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 EPS8Q12929 822 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TRAF3Q13114 568 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PWP1Q13610 501 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 RIN1Q13671 783 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PLEKHG6Q3KR16 790 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TKFCQ3LXA3 575 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GPAT3Q53EU6 434 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 C2CD6Q53TS8 623 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 IGSF11Q5DX21 431 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TREML2Q5T2D2 321 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SYT6Q5T7P8 510 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PIK3R6Q5UE93 754 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM198Q66K66 360 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 STEAP4Q687X5 459 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TIGD3Q6B0B8 471 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 REP15Q6BDI9 236 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TXNRD3NBQ6F5E7 133 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PRMT9Q6P2P2 845 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TRMT10BQ6PF06 316 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PLEKHM3Q6ZWE6 761 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 UTS2BQ765I0 119 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 BEND5Q7L4P6 421 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 KIF18BQ86Y91 864 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 EID3Q8N140 333 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PARP16Q8N5Y8 322 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FNDC5Q8NAU1 212 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CHDHQ8NE62 594 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 OR10T2Q8NGX3 314 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC7A14Q8TBB6 771 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 KCTD4Q8WVF5 259 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FAR1Q8WVX9 515 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC7A6Q92536 515 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 HSD17B14Q9BPX1 270 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 HOPXQ9BPY8 73 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 LXNQ9BS40 222 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 BDH2Q9BUT1 245 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC25A23Q9BV35 468 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ROGDIQ9GZN7 287 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NXF2Q9GZY0 626 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NUAK2Q9H093 628 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM168Q9H0V1 697 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PPA2Q9H2U2 334 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SNX15Q9NRS6 342 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 POLR3BQ9NW08 1133 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DCAF16Q9NXF7 216 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC39A1Q9NY26 324 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 BTG4Q9NY30 223 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 RBAKQ9NYW8 714 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 HSPBP1Q9NZL4 362 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 EHD3Q9NZN3 535 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CCDC59Q9P031 241 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GABBR1Q9UBS5 961 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GMEB2Q9UKD1 530 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ADAM28Q9UKQ2 775 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF175Q9Y473 711 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 IPPQ9Y573 584 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PCDHGB6Q9Y5F9 930 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PCDHGB2Q9Y5G2 931 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PEX16Q9Y5Y5 336 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ADGRA2Q96PE1 1338 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 A0A1W2PRG6 482 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MEIOCA2RUB1 952 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 METTL15A6NJ78 407 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 CLDN24A6NM45 220 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 WDR64B1ANS9 1081 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MRASO14807 208 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TSPAN4O14817 238 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ZBTB5O15062 677 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TBC1D4O60343 1298 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms