RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 COPS2P61201 443 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 PEX6Q13608 980 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 NR1D2Q14995 579 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 SLC1A5Q15758 541 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 SEPT7Q16181 437 aaKnown RBP13.85□□□□□ -0.19
VTI1A-206ENST00000489142 ATP13A5Q4VNC0 1218 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 ARHGAP40Q5TG30 622 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 FAM151BQ6UXP7 276 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 PHYKPLQ8IUZ5 450 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 SFRP1Q8N474 314 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 TTC30BQ8N4P2 665 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 GDAP1Q8TB36 358 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 VAT1Q99536 393 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 FSD1LQ9BXM9 530 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 GBA3Q9H227 469 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 CARD9Q9H257 536 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 RMI1Q9H9A7 625 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 TRIM39Q9HCM9 518 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 KLC4Q9NSK0 619 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 FOXJ2Q9P0K8 574 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 SLC23A2Q9UGH3 650 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 CCDC66A2RUB6 948 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 A6NCN8 305 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 KCNN4O15554 427 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 CCL4P13236 92 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 PSMB4P28070 264 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 GPR3P46089 330 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 HHEXQ03014 270 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 SRSF6Q13247 344 aaKnown RBP13.84□□□□□ -0.19
VTI1A-206ENST00000489142 CLN3Q13286 438 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 EIF3IQ13347 325 aaKnown RBP13.84□□□□□ -0.19
VTI1A-206ENST00000489142 MPP3Q13368 585 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 XRCC4Q13426 336 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 TGIF1Q15583 401 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 CHRNA6Q15825 494 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 INSCQ1MX18 579 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 SNAP47Q5SQN1 464 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 BROXQ5VW32 411 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 IYDQ6PHW0 289 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 DARS2Q6PI48 645 aaKnown RBP13.84□□□□□ -0.19
VTI1A-206ENST00000489142 PEX26Q7Z412 305 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 GLT6D1Q7Z4J2 308 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 CDKL3Q8IVW4 592 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-206ENST00000489142 CCDC110Q8TBZ0 833 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 USP7Q93009 1102 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 PMEPA1Q969W9 287 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 SLC38A3Q99624 504 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 RAD18Q9NS91 495 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 SCHIP1Q9P0W5 487 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-206ENST00000489142 NFKBIL1Q9UBC1 381 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-206ENST00000489142 ARL5AQ9Y689 179 aa13.84□□□□□ -0.19
VTI1A-206ENST00000489142 SMG1Q96Q15 3661 aaKnown RBP13.84□□□□□ -0.19
VTI1A-206ENST00000489142 UGT1A9O60656 530 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 PRB1P04280 392 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 RBP3P10745 1247 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 UGT1A6P19224 532 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 UGT1A1P22309 533 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 UGT1A4P22310 534 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 PTPN7P35236 360 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 UGT1A3P35503 534 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 HMGCLP35914 325 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 FASLGP48023 281 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 GEMP55040 296 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 TMPRSS3P57727 454 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 ANKRD20A2Q5SQ80 823 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.83□□□□□ -0.2
VTI1A-206ENST00000489142 ANKRD20A1Q5TYW2 823 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 ANKRD20A3Q5VUR7 823 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 MICALCLQ6ZW33 695 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 GPR155Q7Z3F1 870 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 ZNF547Q8IVP9 402 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 NAT14Q8WUY8 206 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 AHCYL2Q96HN2 611 aaKnown RBP13.83□□□□□ -0.2
VTI1A-206ENST00000489142 PLEKHG4BQ96PX9 1271 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 CMKLR1Q99788 373 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 DPH1Q9BZG8 443 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 UGT1A7Q9HAW7 530 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 UGT1A10Q9HAW8 530 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 UGT1A8Q9HAW9 530 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 IL26Q9NPH9 171 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.2
VTI1A-206ENST00000489142 IL17CQ9P0M4 197 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 TRHDEQ9UKU6 1024 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 AMFRQ9UKV5 643 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 KCTD3Q9Y597 815 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 CAPN6Q9Y6Q1 641 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 SDK2Q58EX2 2172 aa13.83□□□□□ -0.2
VTI1A-206ENST00000489142 TCRBV7S2A1N4TA0A589 114 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 A8MU76 341 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 C9orf172C9J069 976 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 CHUKO15111 745 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 CDK14O94921 469 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 EPOP01588 193 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 PTMAP06454 111 aaKnown RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 F3P13726 295 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 ZNF7P17097 686 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 HLA-DPA1P20036 260 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 RPL10P27635 214 aaKnown RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 CDC25BP30305 580 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 SPAM1P38567 509 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms