RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CWC15Q9P013 229 aaKnown RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 R3HDM2Q9Y2K5 976 aaKnown RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 NTN3O00634 580 aaPredicted RBP3.48□□□□□ -1.85
RFC4-213ENST00000489028 PLPP2O43688 288 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 ZG16O60844 167 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 CTSVO60911 334 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 EIF2S1P05198 315 aaKnown RBP3.48□□□□□ -1.85
RFC4-213ENST00000489028 GM2AP17900 193 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 DCTP40126 519 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 HOXA1P49639 335 aaPredicted RBP3.48□□□□□ -1.85
RFC4-213ENST00000489028 MMP14P50281 582 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 MRPS34P82930 218 aaKnown RBP3.48□□□□□ -1.85
RFC4-213ENST00000489028 NIPAL4Q0D2K0 466 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 KRTAP27-1Q3LI81 207 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 NCEH1Q6PIU2 408 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 TSPAN33Q86UF1 283 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 HJURPQ8NCD3 748 aaPredicted RBP3.48□□□□□ -1.85
RFC4-213ENST00000489028 UTP15Q8TED0 518 aaKnown RBP3.48□□□□□ -1.85
RFC4-213ENST00000489028 ZNF524Q96C55 264 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 ST6GAL2Q96JF0 529 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 C1orf74Q96LT6 269 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 SEPT5Q99719 369 aaPredicted RBP3.48□□□□□ -1.85
RFC4-213ENST00000489028 LRMDAQ9H2I8 198 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 MAGIXQ9H6Y5 334 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 ZNF696Q9H7X3 374 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 TCP11L1Q9NUJ3 509 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 MARCH4Q9P2E8 410 aaPredicted RBP3.48□□□□□ -1.85
RFC4-213ENST00000489028 POLG2Q9UHN1 485 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 B3GALT5Q9Y2C3 310 aa3.48□□□□□ -1.85
RFC4-213ENST00000489028 PRAG1Q86YV5 1406 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 IGLV5-45A0A087WSX0 123 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 KANSL1LA0AUZ9 987 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 LIPT2A6NK58 231 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 SYNGR3O43761 229 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 BAG4O95429 457 aaKnown RBP3.47□□□□□ -1.85
RFC4-213ENST00000489028 PAX1P15863 534 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 ACADLP28330 430 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 AHRP35869 848 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 CDKN1AP38936 164 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 PRCPP42785 496 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 ZBED6P86452 979 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 SPOCK1Q08629 439 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 SREBF2Q12772 1141 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 PDE1CQ14123 709 aaPredicted RBP3.47□□□□□ -1.85
RFC4-213ENST00000489028 ADIPOQQ15848 244 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 HSP90AB4PQ58FF6 505 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 TMEM198Q66K66 360 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 PLXDC2Q6UX71 529 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 GLDNQ6ZMI3 551 aaPredicted RBP3.47□□□□□ -1.85
RFC4-213ENST00000489028 ANO5Q75V66 913 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 PIWIL4Q7Z3Z4 852 aaKnown RBP3.47□□□□□ -1.85
RFC4-213ENST00000489028 PM20D2Q8IYS1 436 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 RNF168Q8IYW5 571 aaPredicted RBP3.47□□□□□ -1.85
RFC4-213ENST00000489028 SLC38A9Q8NBW4 561 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 OR8K5Q8NH50 307 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 PHF21AQ96BD5 680 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 GFI1Q99684 422 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 TFB2MQ9H5Q4 396 aaKnown RBP3.47□□□□□ -1.85
RFC4-213ENST00000489028 SETD4Q9NVD3 440 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 IRAK4Q9NWZ3 460 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 ORC3Q9UBD5 711 aaPredicted RBP3.47□□□□□ -1.85
RFC4-213ENST00000489028 AASSQ9UDR5 926 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 FBXW11Q9UKB1 542 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 TCF19Q9Y242 345 aa3.47□□□□□ -1.85
RFC4-213ENST00000489028 TMEM184BQ9Y519 407 aaPredicted RBP3.47□□□□□ -1.85
RFC4-213ENST00000489028 FAM72CH0Y354 149 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 MAP2K7O14733 419 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 PRKNO60260 465 aaPredicted RBP3.46□□□□□ -1.86
RFC4-213ENST00000489028 NDUFS3O75489 264 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 HSPA1AP0DMV8 641 aaKnown RBP3.46□□□□□ -1.86
RFC4-213ENST00000489028 HSPA1BP0DMV9 641 aaKnown RBP3.46□□□□□ -1.86
RFC4-213ENST00000489028 SELLP14151 372 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 GALCP54803 685 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 GOLGA8DPQ0D2H9 430 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 GAGE5Q13069 117 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 GAGE6Q13070 117 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 NAB2Q15742 525 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 FAM72AQ5TYM5 149 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 SNX30Q5VWJ9 437 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 ARHGAP17Q68EM7 881 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 FAM72DQ6L9T8 149 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 ADAM5Q6NVV9 412 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 CFAP77Q6ZQR2 320 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 DGLUCYQ7Z3D6 616 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 FAM72BQ86X60 149 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 TRPC4APQ8TEL6 797 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 SGCDQ92629 289 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 ARHGEF2Q92974 986 aaKnown RBP3.46□□□□□ -1.86
RFC4-213ENST00000489028 ELMOD3Q96FG2 381 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 SCRN2Q96FV2 425 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 ZNF354BQ96LW1 612 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 ITPAQ9BY32 194 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 SIL1Q9H173 461 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 MUC13Q9H3R2 512 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 EPB41L5Q9HCM4 733 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 TRPC7Q9HCX4 862 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 RRP7BPQ9NSQ0 103 aa3.46□□□□□ -1.86
RFC4-213ENST00000489028 UBA2Q9UBT2 640 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms