RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PPIL3Q9H2H8 161 aaKnown RBP3.4□□□□□ -1.87
PRPF4-203ENST00000488937 SLCO5A1Q9H2Y9 848 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 COQ10BQ9H8M1 238 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 LMAN1LQ9HAT1 526 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 ENTPD7Q9NQZ7 604 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 PRMT7Q9NVM4 692 aaPredicted RBP3.4□□□□□ -1.87
PRPF4-203ENST00000488937 TMOD3Q9NYL9 352 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 SPG21Q9NZD8 308 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 DNAJB4Q9UDY4 337 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 CCPG1Q9ULG6 757 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 PLEKHA6Q9Y2H5 1048 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 ACEP12821 1306 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 NPHP3Q7Z494 1330 aa3.4□□□□□ -1.87
PRPF4-203ENST00000488937 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 A0A0A6YYC8 382 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 A0A0G2JPF8 293 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 OR6C68A6NDL8 312 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 LACTBL1A8MY62 500 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 PRR5-ARHGAP8B1AHC4 643 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 HNRNPCL3B7ZW38 293 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 F8WDY8 70 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 I3L1I5 382 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 DSCR3O14972 297 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 MAGEB3O15480 346 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ST8SIA3O43173 380 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SEC14L5O43304 696 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 PMPCBO75439 489 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TOMM70O94826 608 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 AKR7A3O95154 331 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 KCNK5O95279 499 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 PRAMEF12O95522 483 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 HNRNPCL4P0DMR1 293 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 NCF1P14598 390 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ZNF182P17025 639 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SFPQP23246 707 aaKnown RBP eCLIP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SFNP31947 248 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CHRNA3P32297 505 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CTNNB1P35222 781 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SOX6P35712 828 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CDKN1AP38936 164 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 PTGER3P43115 390 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 DHPSP49366 369 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 OAZ1P54368 228 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ADPRHP54922 357 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TAS2R40P59535 323 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CUL2Q13617 745 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 DYRK1AQ13627 763 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 IDI1Q13907 227 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 LPIN1Q14693 890 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 DRAP1Q14919 205 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 DLG2Q15700 870 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 NAB2Q15742 525 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TAZQ16635 292 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CDONQ4KMG0 1287 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 EPC2Q52LR7 807 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 C10orf76Q5T2E6 689 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 FAM102AQ5T9C2 384 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 C6orf163Q5TEZ5 329 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TMEM198Q66K66 360 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 PM20D1Q6GTS8 502 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TMEM211Q6ICI0 200 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 KYAT3Q6YP21 454 aaKnown RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 C11orf57Q6ZUT1 292 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ARMCX2Q7L311 632 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 GPAT4Q86UL3 456 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CAND1Q86VP6 1230 aaKnown RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 AMZ2Q86W34 360 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CDH26Q8IXH8 852 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 IQCF2Q8IXL9 164 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ZNF595Q8IYB9 648 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 PM20D2Q8IYS1 436 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ADGRG5Q8IZF4 528 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SCAIQ8N9R8 606 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 EXOC6Q8TAG9 804 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SCARB1Q8WTV0 552 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TMEM170AQ8WVE7 144 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ANKRD49Q8WVL7 239 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ROBO4Q8WZ75 1007 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SLAMF9Q96A28 289 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 GIMAP5Q96F15 307 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 HES6Q96HZ4 224 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 COG3Q96JB2 828 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CNOT6LQ96LI5 555 aaKnown RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SEMA3CQ99985 751 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CPPED1Q9BRF8 314 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 POLR3CQ9BUI4 534 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 RTN4RQ9BZR6 473 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ECT2Q9H8V3 914 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SFXN1Q9H9B4 322 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 NGBQ9NPG2 151 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TRPV5Q9NQA5 729 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CENPMQ9NSP4 180 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 FAM212BQ9NTI7 297 aaPredicted RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 ABHD10Q9NUJ1 306 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 TMOD2Q9NZR1 351 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SEMA5BQ9P283 1151 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 FBXO40Q9UH90 709 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SNX7Q9UNH6 387 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms