RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 CD3EAPO15446 510 aaKnown RBP10.2□□□□□ -0.78
SKA1-204ENST00000488454 DFNA5O60443 496 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 BANF1O75531 89 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 ZIC2O95409 532 aaPredicted RBP10.2□□□□□ -0.78
SKA1-204ENST00000488454 TNFP01375 233 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 WNT1P04628 370 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 TUBBP07437 444 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 FBXO45P0C2W1 286 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 MSH3P20585 1137 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 AKT1P31749 480 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 MAGEA4P43358 317 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 BLKP51451 505 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 ARSDP51689 593 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 NXPH1P58417 271 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 KIAA1024LP59773 190 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 XIAPP98170 497 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 NHLH1Q02575 133 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 CBLBQ13191 982 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 PEX6Q13608 980 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 GTF2H3Q13889 308 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 CCDC6Q16204 474 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 KIAA0930Q6ICG6 404 aaPredicted RBP10.2□□□□□ -0.78
SKA1-204ENST00000488454 MRNIPQ6NTE8 343 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 LAYNQ6UX15 382 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 CERS6Q6ZMG9 384 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 PELI3Q8N2H9 469 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 OXR1Q8N573 874 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 EIF1ADQ8N9N8 165 aaKnown RBP10.2□□□□□ -0.78
SKA1-204ENST00000488454 OR56A4Q8NGH8 313 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 CALML6Q8TD86 181 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 ITPKCQ96DU7 683 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 SGSM3Q96HU1 749 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 WDR92Q96MX6 357 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 FCRL3Q96P31 734 aaPredicted RBP10.2□□□□□ -0.78
SKA1-204ENST00000488454 COPS8Q99627 209 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 TRPM6Q9BX84 2022 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 LGR4Q9BXB1 951 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 ZCCHC2Q9C0B9 1178 aaKnown RBP10.2□□□□□ -0.78
SKA1-204ENST00000488454 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 TRIM39Q9HCM9 518 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 RRAGDQ9NQL2 400 aaPredicted RBP10.2□□□□□ -0.78
SKA1-204ENST00000488454 CATSPERZQ9NTU4 200 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 KLQ9UEF7 1012 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 SPTY2D1-AS1A0A0U1RR47 76 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 F8W8V4 182 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 H3BM21 787 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 TNFRSF10CO14798 259 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 VEGFDO43915 354 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 FOXD2O60548 495 aaPredicted RBP10.19□□□□□ -0.78
SKA1-204ENST00000488454 LRP3O75074 770 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 NDUFS3O75489 264 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 CDK14O94921 469 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 SOD1P00441 154 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 GSTA2P09210 222 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 ZNF806P0C7X5 589 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 ARRB1P49407 418 aaPredicted RBP10.19□□□□□ -0.78
SKA1-204ENST00000488454 TTPAP49638 278 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 SRP54P61011 504 aaKnown RBP10.19□□□□□ -0.78
SKA1-204ENST00000488454 IRX4P78413 519 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 PPARDQ03181 441 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 SPEM2Q0P670 501 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 CRYMQ14894 314 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 SLMAPQ14BN4 828 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 ERCC6LQ2NKX8 1250 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 KIF19Q2TAC6 998 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 NEPROQ6NW34 567 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 DOK6Q6PKX4 331 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 KDM7AQ6ZMT4 941 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 MACC1Q6ZN28 852 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 UNC5AQ6ZN44 842 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 C3orf62Q6ZUJ4 267 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 RD3Q7Z3Z2 195 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 TRIM46Q7Z4K8 759 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 TRIM74Q86UV6 250 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 PARGQ86W56 976 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 SERPINA9Q86WD7 417 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 HID1Q8IV36 788 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 IGDCC3Q8IVU1 814 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 LMNTD2Q8IXW0 634 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 AGGF1Q8N302 714 aaeCLIP10.19□□□□□ -0.78
SKA1-204ENST00000488454 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.19□□□□□ -0.78
SKA1-204ENST00000488454 COX14Q96I36 57 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 GTPBP2Q9BX10 602 aaKnown RBP10.19□□□□□ -0.78
SKA1-204ENST00000488454 SLC13A1Q9BZW2 595 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 RMI1Q9H9A7 625 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 ERVMER34-1Q9H9K5 563 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 ARFGAP3Q9NP61 516 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 SMOXQ9NWM0 555 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 DNAJC28Q9NX36 388 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 ZDHHC3Q9NYG2 299 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.19□□□□□ -0.78
SKA1-204ENST00000488454 CNOT6Q9ULM6 557 aaKnown RBP10.19□□□□□ -0.78
SKA1-204ENST00000488454 TMEM98Q9Y2Y6 226 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 SNX11Q9Y5W9 270 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 V9GYY5 206 aaPredicted RBP10.19□□□□□ -0.78
SKA1-204ENST00000488454 THADAQ6YHU6 1953 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 PLXND1Q9Y4D7 1925 aa10.19□□□□□ -0.78
SKA1-204ENST00000488454 ZCWPW2A0A1B0GU75 182 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 TMEM202A6NGA9 273 aa10.18□□□□□ -0.78
SKA1-204ENST00000488454 OR51F1A6NGY5 319 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms