RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DHX9Q08211 1270 aaKnown RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 CALCOCO2Q13137 446 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 LAMB3Q13751 1172 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 HIF1AQ16665 826 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 SKIDA1Q1XH10 827 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 DEFB133Q30KQ1 61 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 BBS9Q3SYG4 887 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 DNTTIP2Q5QJE6 756 aaKnown RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 HP1BP3Q5SSJ5 553 aaPredicted RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 AFTPHQ6ULP2 937 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 DET1Q7L5Y6 550 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 NLRP9Q7RTR0 991 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 SNX20Q7Z614 316 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 ADGRG6Q86SQ4 1221 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 GALNT13Q8IUC8 556 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 NAXDQ8IW45 347 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 PIANPQ8IYJ0 282 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 NXPE1Q8N323 547 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 SLC25A45Q8N413 288 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 MMGT1Q8N4V1 131 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 OR6P1Q8NGX9 317 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 CCL4L1Q8NHW4 92 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 DTX3LQ8TDB6 740 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 SETD7Q8WTS6 366 aaKnown RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 STAMBPL1Q96FJ0 436 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 OR2M4Q96R27 311 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 CLPBQ9H078 707 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 RAB17Q9H0T7 212 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 TMEM168Q9H0V1 697 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 MRM3Q9HC36 420 aaKnown RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 IL1RAPL1Q9NZN1 696 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 WHRNQ9P202 907 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 VPS18Q9P253 973 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 MARCH4Q9P2E8 410 aaPredicted RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 SPASTQ9UBP0 616 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 RIMKLBQ9ULI2 386 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 CHMP2BQ9UQN3 213 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 UTP11Q9Y3A2 253 aaKnown RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 PLEKHM1Q9Y4G2 1056 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 ASXL3Q9C0F0 2248 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 RP1P56715 2156 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 TRBV5-4A0A0C4DH59 114 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 SDR42E2A6NKP2 422 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 GOLGA8KD6RF30 607 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 GOLGA8TH3BQL2 631 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 TRIM38O00635 465 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 SLC30A4O14863 429 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 FLRT2O43155 660 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 SH3BP5O60239 455 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 TNFP01375 233 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 F7P08709 466 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-210ENST00000488228 ACP5P13686 325 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 CTSEP14091 401 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 AK4P27144 223 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-210ENST00000488228 BLKP51451 505 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 B4GALNT1Q00973 533 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 SEMA3AQ14563 771 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 FASTKD3Q14CZ7 662 aaKnown RBP10.92□□□□□ -0.66
UBE4B-210ENST00000488228 DBN1Q16643 649 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 DNAJC21Q5F1R6 531 aaKnown RBP10.92□□□□□ -0.66
UBE4B-210ENST00000488228 LDLRAP1Q5SW96 308 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 TAS2R42Q7RTR8 314 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 SERPINA9Q86WD7 417 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 TRAPPC5Q8IUR0 188 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 IGDCC3Q8IVU1 814 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 EID2Q8N6I1 236 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 OTUD6BQ8N6M0 293 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 CEP112Q8N8E3 955 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 RASGEF1AQ8N9B8 481 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 DEFB124Q8NES8 71 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 PEX13Q92968 403 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 ULK4Q96C45 1275 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 CFAP36Q96G28 342 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 SCARF2Q96GP6 870 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-210ENST00000488228 SIGLEC10Q96LC7 697 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 FCRL3Q96P31 734 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-210ENST00000488228 C19orf43Q9BQ61 176 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 BOCQ9BWV1 1114 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 ZCCHC2Q9C0B9 1178 aaKnown RBP10.92□□□□□ -0.66
UBE4B-210ENST00000488228 L2HGDHQ9H9P8 463 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 TRIM39Q9HCM9 518 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 GPSM3Q9Y4H4 160 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 PCDHGB2Q9Y5G2 931 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 ST14Q9Y5Y6 855 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 RPS6KL1Q9Y6S9 549 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 CACNA1AO00555 2505 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 DCHS1Q96JQ0 3298 aa10.92□□□□□ -0.66
UBE4B-210ENST00000488228 FAM237BA0A1B0GVD1 139 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 OR2AG2A6NM03 316 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 AGAP14A8MT82 685 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 GRID2O43424 1007 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 NUAK1O60285 661 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 VAPBO95292 243 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 GIMD1P0DJR0 217 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 MYF5P13349 255 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 PGAM1P18669 254 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 MSH3P20585 1137 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 KCNA4P22459 653 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 ACRV1P26436 265 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 PBLDP30039 288 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms