RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 USP12O75317 370 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 LAMP2P13473 410 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 SERPINB5P36952 375 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 PKNOX1P55347 436 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 SKIV2LQ15477 1246 aaKnown RBP13.64□□□□□ -0.23
COPS7B-221ENST00000488111 NRF1Q16656 503 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 EML3Q32P44 896 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 RNF135Q8IUD6 432 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 SMRP1Q8NCR6 262 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 MAPK15Q8TD08 544 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 FGF14Q92915 247 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 PLEKHA8Q96JA3 519 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 OR52B2Q96RD2 323 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 MLPHQ9BV36 600 aaPredicted RBP13.64□□□□□ -0.23
COPS7B-221ENST00000488111 UBA2Q9UBT2 640 aaPredicted RBP13.64□□□□□ -0.23
COPS7B-221ENST00000488111 INTS6Q9UL03 887 aaKnown RBP13.64□□□□□ -0.23
COPS7B-221ENST00000488111 DOLKQ9UPQ8 538 aa13.64□□□□□ -0.23
COPS7B-221ENST00000488111 MYO18AQ92614 2054 aaKnown RBP13.63□□□□□ -0.23
COPS7B-221ENST00000488111 PSMD12O00232 456 aaPredicted RBP13.63□□□□□ -0.23
COPS7B-221ENST00000488111 CD160O95971 181 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 MT-CO1P00395 513 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 CYP17A1P05093 508 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 MSX2P35548 267 aaPredicted RBP13.63□□□□□ -0.23
COPS7B-221ENST00000488111 DPP6P42658 865 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 MTHFRP42898 656 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 RFTN1Q14699 578 aaPredicted RBP13.63□□□□□ -0.23
COPS7B-221ENST00000488111 KCTD21Q4G0X4 260 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 KDELC2Q7Z4H8 507 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 CENPSQ8N2Z9 138 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 MPP5Q8N3R9 675 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 ZNF781Q8N8C0 355 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 TBC1D15Q8TC07 691 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 CHPT1Q8WUD6 406 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 OTUB2Q96DC9 234 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 EXOC2Q96KP1 924 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 APOL2Q9BQE5 337 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 TMEM79Q9BSE2 394 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 ANKRD60Q9BZ19 345 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 PAIP1Q9H074 479 aaKnown RBP13.63□□□□□ -0.23
COPS7B-221ENST00000488111 TCF7L2Q9NQB0 619 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 VPS51Q9UID3 782 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 FAM32AQ9Y421 112 aaKnown RBP13.63□□□□□ -0.23
COPS7B-221ENST00000488111 ALDH1A2O94788 518 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 KCNA5P22460 613 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 GABRB3P28472 473 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 RXRGP48443 463 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 DSC2Q02487 901 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 NIPAL4Q0D2K0 466 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 COL19A1Q14993 1142 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 HERC3Q15034 1050 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 IL23RQ5VWK5 629 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 STEAP4Q687X5 459 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 KRT80Q6KB66 452 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 NIPAL1Q6NVV3 410 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 CPSF7Q8N684 471 aaKnown RBP13.63□□□□□ -0.23
COPS7B-221ENST00000488111 TEX26Q8N6G2 289 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 DDHD1Q8NEL9 900 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 RCN3Q96D15 328 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 DOK1Q99704 481 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 TMEM216Q9P0N5 145 aa13.63□□□□□ -0.23
COPS7B-221ENST00000488111 K7ERQ8 282 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 NELFEP18615 380 aaKnown RBP13.62□□□□□ -0.23
COPS7B-221ENST00000488111 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
COPS7B-221ENST00000488111 CDH15P55291 814 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 C21orf59P57076 290 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 ESRRGP62508 458 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 ZNF235Q14590 738 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 PLEKHG6Q3KR16 790 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 RPL10LQ96L21 214 aaKnown RBP13.62□□□□□ -0.23
COPS7B-221ENST00000488111 CDX2Q99626 313 aaPredicted RBP13.62□□□□□ -0.23
COPS7B-221ENST00000488111 GPATCH1Q9BRR8 931 aaKnown RBP13.62□□□□□ -0.23
COPS7B-221ENST00000488111 DCUN1D5Q9BTE7 237 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 ZNF385DQ9H6B1 395 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 PALMDQ9NP74 551 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 CD207Q9UJ71 328 aa13.62□□□□□ -0.23
COPS7B-221ENST00000488111 A0A087WXM4 84 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 K7EPI3 171 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 PMPCBO75439 489 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 ATE1O95260 518 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 ZBTB11O95625 1053 aaPredicted RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 ADH5P11766 374 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 TPSB2P20231 275 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 RGRP47804 291 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 IHHQ14623 411 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 TPSAB1Q15661 275 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 PCSK7Q16549 785 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 PRPF38BQ5VTL8 546 aaKnown RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 NANOGP8Q6NSW7 305 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 LYSMD3Q7Z3D4 306 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 C12orf40Q86WS4 652 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 C17orf50Q8WW18 174 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 FATE1Q969F0 183 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 LMLNQ96KR4 655 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 FCRL5Q96RD9 977 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 FAM83CQ9BQN1 747 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 WDR41Q9HAD4 459 aa13.61□□□□□ -0.23
COPS7B-221ENST00000488111 THG1LQ9NWX6 298 aaKnown RBP13.61□□□□□ -0.23
COPS7B-221ENST00000488111 PTBP2Q9UKA9 531 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms