RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 CDKN1CP49918 316 aaPredicted RBP19.35■□□□□ 0.69
SEC22A-208ENST00000487572 ITGA8P53708 1063 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 ILF3Q12906 894 aaKnown RBP eCLIP19.35■□□□□ 0.69
SEC22A-208ENST00000487572 TUBB2AQ13885 445 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 GTF2H3Q13889 308 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 CES3Q6UWW8 571 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 HOOK3Q86VS8 718 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 GKN2Q86XP6 184 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 DDHD1Q8NEL9 900 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 OR6P1Q8NGX9 317 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 OR4C6Q8NH72 309 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 ULK4Q96C45 1275 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 CNDP2Q96KP4 475 aaKnown RBP19.35■□□□□ 0.69
SEC22A-208ENST00000487572 TUBB2BQ9BVA1 445 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 SAMD15Q9P1V8 674 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 RIMKLBQ9ULI2 386 aa19.35■□□□□ 0.69
SEC22A-208ENST00000487572 TDRD6O60522 2096 aaKnown RBP19.35■□□□□ 0.69
SEC22A-208ENST00000487572 SPAARA0A1B0GVQ0 90 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 SDR42E2A6NKP2 422 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 GRID2O43424 1007 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 VEGFDO43915 354 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 SEC31AO94979 1220 aaKnown RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 LDOC1O95751 146 aaPredicted RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 GOT2P00505 430 aaKnown RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 MSH3P20585 1137 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 PSMA3P25788 255 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 AK4P27144 223 aaPredicted RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 RPL21P46778 160 aaKnown RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 PRAMEP78395 509 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 CTBSQ01459 385 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 CACNG1Q06432 222 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 TMEM115Q12893 351 aaPredicted RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 MORF4L2Q15014 288 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 TRIP6Q15654 476 aaKnown RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 PLA2G4EQ3MJ16 856 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 SLC30A9Q6PML9 568 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 AFTPHQ6ULP2 937 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 DET1Q7L5Y6 550 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 CHST15Q7LFX5 561 aaPredicted RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 NXPE1Q8N323 547 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 BAHD1Q8TBE0 780 aaPredicted RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 NAT14Q8WUY8 206 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 CDC6Q99741 560 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 ERP44Q9BS26 406 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 KIFC1Q9BW19 673 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 GSDMCQ9BYG8 508 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 ZCCHC2Q9C0B9 1178 aaKnown RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 RMI1Q9H9A7 625 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 TRNAU1APQ9NX07 287 aaKnown RBP19.34■□□□□ 0.69
SEC22A-208ENST00000487572 SIRPGQ9P1W8 387 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 ANAPC5Q9UJX4 755 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 SOX13Q9UN79 622 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 MAD1L1Q9Y6D9 718 aa19.34■□□□□ 0.69
SEC22A-208ENST00000487572 MYF5P13349 255 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 ACP5P13686 325 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 MAGEA3P43357 314 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 ACVR1Q04771 509 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 SMAD1Q15797 465 aaKnown RBP19.33■□□□□ 0.68
SEC22A-208ENST00000487572 GPR33Q49SQ1 333 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 FNBP1LQ5T0N5 605 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 HIBCHQ6NVY1 386 aaPredicted RBP19.33■□□□□ 0.68
SEC22A-208ENST00000487572 SERPINA9Q86WD7 417 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 NRROSQ86YC3 692 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 TRAPPC5Q8IUR0 188 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 PIANPQ8IYJ0 282 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 RASGEF1AQ8N9B8 481 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 MNS1Q8NEH6 495 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 FAM46DQ8NEK8 389 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 GPBAR1Q8TDU6 330 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 SCG3Q8WXD2 468 aaKnown RBP19.33■□□□□ 0.68
SEC22A-208ENST00000487572 PEX13Q92968 403 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 MFSD3Q96ES6 412 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 DCUN1D1Q96GG9 259 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 TRIM56Q9BRZ2 755 aaKnown RBP19.33■□□□□ 0.68
SEC22A-208ENST00000487572 DUSP23Q9BVJ7 150 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 MRM3Q9HC36 420 aaKnown RBP19.33■□□□□ 0.68
SEC22A-208ENST00000487572 TREX1Q9NSU2 369 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 GPR34Q9UPC5 381 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 ST14Q9Y5Y6 855 aa19.33■□□□□ 0.68
SEC22A-208ENST00000487572 CTAGE15A4D2H0 777 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 OR2AG2A6NM03 316 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 GPR89AB7ZAQ6 455 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 TPP1O14773 563 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 BANF1O75531 89 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 GPR89BP0CG08 455 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 CTAGE8P0CG41 777 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 CEACAM1P13688 526 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 ACRV1P26436 265 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 ACTR1BP42025 376 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 ACTR1AP61163 376 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 SIM1P81133 766 aaPredicted RBP19.32■□□□□ 0.68
SEC22A-208ENST00000487572 BBS9Q3SYG4 887 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 CCDC157Q569K6 752 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 PPM1JQ5JR12 505 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 ZCCHC8Q6NZY4 707 aaKnown RBP19.32■□□□□ 0.68
SEC22A-208ENST00000487572 C8orf74Q6P047 294 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 CTAGE6Q86UF2 777 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 LRRTM4Q86VH4 590 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 CTAGE4Q8IX94 777 aa19.32■□□□□ 0.68
SEC22A-208ENST00000487572 AGGF1Q8N302 714 aaeCLIP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms