RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ARFGAP3Q9NP61 516 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 KLC4Q9NSK0 619 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 AMACRQ9UHK6 382 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 NBPF19A0A087WUL8 3843 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 CDC14CA4D256 554 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 RGSL1A5PLK6 1076 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 TOX3O15405 576 aaPredicted RBP19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 HLA-DQB2P05538 268 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 XRCC1P18887 633 aaPredicted RBP19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 UQCRFS1P47985 274 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 PMS2P54278 862 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 IL11RAQ14626 422 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 PAFAH1B3Q15102 231 aaKnown RBP19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 QPCTQ16769 361 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 ANKRD20A8PQ5CZ79 823 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 RASGRP3Q8IV61 690 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 FAM71BQ8TC56 605 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 FATE1Q969F0 183 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 OR2AG1Q9H205 316 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 ZNF624Q9P2J8 865 aaPredicted RBP19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 TLK1Q9UKI8 766 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 TEX15Q9BXT5 2789 aa19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 USP9XQ93008 2570 aaPredicted RBP19.17■□□□□ 0.66
SMPDL3A-202ENST00000487215 GOLGA6L3A6NEY3 463 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 VIPP01282 170 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 PDGFAP04085 211 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 SKILP12757 684 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 AMD1P17707 334 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 CCNCP24863 283 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 SLC19A1P41440 591 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 IFI16Q16666 785 aaKnown RBP19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 PLA2G4EQ3MJ16 856 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 CCDC122Q5T0U0 273 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 HIST2H2BCQ6DN03 193 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 CRTC3Q6UUV7 619 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 TRIM48Q8IWZ4 208 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 CCHCR1Q8TD31 782 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 LRRN4Q8WUT4 740 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 EID2BQ96D98 161 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 TSGA13Q96PP4 275 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 MLPHQ9BV36 600 aaPredicted RBP19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 RTN4Q9NQC3 1192 aaKnown RBP19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 HAUS2Q9NVX0 235 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 DTLQ9NZJ0 730 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 SLC23A2Q9UGH3 650 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 LNPEPQ9UIQ6 1025 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 KCND3Q9UK17 655 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 PCDHGA6Q9Y5G7 932 aa19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 ZNF106Q9H2Y7 1883 aaKnown RBP19.16■□□□□ 0.66
SMPDL3A-202ENST00000487215 UTP20O75691 2785 aaKnown RBP19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 ANKRD66B4E2M5 251 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 KIF1CO43896 1103 aaKnown RBP19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 SPAG6O75602 509 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 CREG1O75629 220 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 RASSF9O75901 435 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 MTA2O94776 668 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 FGF5P12034 268 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 ARSEP51690 589 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 DNASE1L3Q13609 305 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 DPYSL3Q14195 570 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 INSCQ1MX18 579 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 TDRD12Q587J7 1177 aaKnown RBP19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 ZNF569Q5MCW4 686 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 ALS2CLQ60I27 953 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 PRSS42Q7Z5A4 293 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 ADGRG6Q86SQ4 1221 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 RSC1A1Q92681 617 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 SPATA16Q9BXB7 569 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 TWSG1Q9GZX9 223 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 TRIM39Q9HCM9 518 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 IP6K2Q9UHH9 426 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 ANAPC7Q9UJX3 599 aa19.15■□□□□ 0.66
SMPDL3A-202ENST00000487215 PIPSLA2A3N6 862 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 GPR89AB7ZAQ6 455 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 CHUKO15111 745 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 DNAJB5O75953 348 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 SLC25A14O95258 325 aaPredicted RBP19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 MMP2P08253 660 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 CCNYL3P0C7X3 344 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 GPR89BP0CG08 455 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 CD86P42081 329 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 CAPZBP47756 277 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 SEPT7Q16181 437 aaKnown RBP19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 APLFQ8IW19 511 aaPredicted RBP19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 CT55Q8WUE5 264 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 KLHL6Q8WZ60 621 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 THAP2Q9H0W7 228 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 POT1Q9NUX5 634 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 PADI1Q9ULC6 663 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 DNAJC16Q9Y2G8 782 aa19.14■□□□□ 0.65
SMPDL3A-202ENST00000487215 PDZK1P1A8MUH7 402 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 VPS4BO75351 444 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 TIAF1O95411 115 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 RECKO95980 971 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 BRAFP15056 766 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 GNLYP22749 145 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 CASP14P31944 242 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 SSR1P43307 286 aaKnown RBP19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 GALNT3Q14435 633 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms