RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 PDLIM2Q96JY6 352 aa11.85□□□□□ -0.51
GSDMB-210ENST00000486560 DNAJC1Q96KC8 554 aaKnown RBP11.85□□□□□ -0.51
GSDMB-210ENST00000486560 DEPDC7Q96QD5 511 aa11.85□□□□□ -0.51
GSDMB-210ENST00000486560 GFM1Q96RP9 751 aaKnown RBP11.85□□□□□ -0.51
GSDMB-210ENST00000486560 OSBPL9Q96SU4 736 aa11.85□□□□□ -0.51
GSDMB-210ENST00000486560 NAP1L3Q99457 506 aaPredicted RBP11.85□□□□□ -0.51
GSDMB-210ENST00000486560 TRIM39Q9HCM9 518 aa11.85□□□□□ -0.51
GSDMB-210ENST00000486560 IL26Q9NPH9 171 aa11.85□□□□□ -0.51
GSDMB-210ENST00000486560 HOMER3Q9NSC5 361 aa11.85□□□□□ -0.51
GSDMB-210ENST00000486560 CACNA1AO00555 2505 aa11.85□□□□□ -0.51
GSDMB-210ENST00000486560 KMOO15229 486 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 ZNF185O15231 689 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 CASC3O15234 703 aaKnown RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 NUAK1O60285 661 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 NOBOXO60393 691 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 DNAJC6O75061 913 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 CSO75390 466 aaKnown RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 GP1BAP07359 652 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 MC4RP32245 332 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 HADHAP40939 763 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 SESN2P58004 480 aaPredicted RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 CCL7P80098 99 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 CDH17Q12864 832 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 TMEM115Q12893 351 aaPredicted RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 SIX1Q15475 284 aaPredicted RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 SMAD1Q15797 465 aaKnown RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 ST3GAL2Q16842 350 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 MAP9Q49MG5 647 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 KHDC1Q4VXA5 237 aaKnown RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 LDLRAP1Q5SW96 308 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 PDPK2PQ6A1A2 396 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 CCNI2Q6ZMN8 369 aaPredicted RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 MICALCLQ6ZW33 695 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 CCNJLQ8IV13 435 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 TRIM48Q8IWZ4 208 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 MDM1Q8TC05 714 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 ZNF398Q8TD17 642 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 COG1Q8WTW3 980 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 STN1Q9H668 368 aaKnown RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 RMI1Q9H9A7 625 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 EPB41L5Q9HCM4 733 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 FEZ2Q9UHY8 353 aaPredicted RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 RABGEF1Q9UJ41 708 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 APPL1Q9UKG1 709 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 ATXN7L1Q9ULK2 861 aaPredicted RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 ZKSCAN5Q9Y2L8 839 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 PCYT1BQ9Y5K3 369 aaPredicted RBP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
GSDMB-210ENST00000486560 RNF215Q9Y6U7 377 aa11.84□□□□□ -0.51
GSDMB-210ENST00000486560 NCOR2Q9Y618 2525 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 TRABD2BA6NFA1 517 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 ERI2A8K979 691 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 VEGFDO43915 354 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 PPFIA2O75334 1257 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 SRP72O76094 671 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 KRT14P02533 472 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 RALBP11234 206 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 GLB1P16278 677 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 ZNF7P17097 686 aaPredicted RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 VCLP18206 1134 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 RPL10P27635 214 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 GRIA1P42261 906 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 CYP4F3Q08477 520 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 GPS1Q13098 491 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 NFATC2Q13469 925 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 LRP8Q14114 963 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 C3orf38Q5JPI3 329 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 FNBP1LQ5T0N5 605 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 CERCAMQ5T4B2 595 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 GPRC6AQ5T6X5 926 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 KCTD11Q693B1 232 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 DENND5AQ6IQ26 1287 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 CCDC137Q6PK04 289 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 RBM44Q6ZP01 1051 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 C17orf53Q8N3J3 647 aaPredicted RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 OTUD6BQ8N6M0 293 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 PRELID2Q8N945 189 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 PPHLN1Q8NEY8 458 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 GPR156Q8NFN8 814 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 OR6C4Q8NGE1 309 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 RTP4Q96DX8 246 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 AHCYL2Q96HN2 611 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 VPS35Q96QK1 796 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 FOXP3Q9BZS1 431 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 CCDC86Q9H6F5 360 aaKnown RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 PRDM8Q9NQV8 689 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 NFKBIL1Q9UBC1 381 aaPredicted RBP11.83□□□□□ -0.52
GSDMB-210ENST00000486560 SNX12Q9UMY4 172 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 WASF3Q9UPY6 502 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 PCDHB1Q9Y5F3 818 aa11.83□□□□□ -0.52
GSDMB-210ENST00000486560 HEATR9A2RTY3 570 aa11.82□□□□□ -0.52
GSDMB-210ENST00000486560 ZW10O43264 779 aa11.82□□□□□ -0.52
GSDMB-210ENST00000486560 DKK1O94907 266 aa11.82□□□□□ -0.52
GSDMB-210ENST00000486560 SLC2A4P14672 509 aa11.82□□□□□ -0.52
GSDMB-210ENST00000486560 ZNF140P52738 457 aaPredicted RBP11.82□□□□□ -0.52
GSDMB-210ENST00000486560 OR1D5P58170 312 aa11.82□□□□□ -0.52
GSDMB-210ENST00000486560 PRAMEP78395 509 aa11.82□□□□□ -0.52
GSDMB-210ENST00000486560 HHEXQ03014 270 aa11.82□□□□□ -0.52
GSDMB-210ENST00000486560 HLTFQ14527 1009 aaKnown RBP eCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms