RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 NCSTNQ92542 709 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 GLYATL1Q969I3 302 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 CATSPER2Q96P56 530 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 VPS35Q96QK1 796 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 EFHD1Q9BUP0 239 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 OR2AG1Q9H205 316 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 TRIT1Q9H3H1 467 aaKnown RBP11.31□□□□□ -0.6
SCFD1-206ENST00000484733 GLOD4Q9HC38 313 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 WASH6PQ9NQA3 447 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 TMEM184BQ9Y519 407 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-206ENST00000484733 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 HELZ2Q9BYK8 2649 aaKnown RBP11.31□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF891A8MT65 544 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-206ENST00000484733 KMOO15229 486 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 PPFIA2O75334 1257 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 SLC25A14O95258 325 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-206ENST00000484733 NDST3O95803 873 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 NR2C2P49116 596 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 ANKS6Q68DC2 871 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 BZW1Q7L1Q6 419 aaKnown RBP11.31□□□□□ -0.6
SCFD1-206ENST00000484733 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 PLXDC1Q8IUK5 500 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 RHOT1Q8IXI2 618 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 SLC45A3Q96JT2 553 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 PLEKHG4BQ96PX9 1271 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 CLMPQ9H6B4 373 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 PRDM8Q9NQV8 689 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 ABHD10Q9NUJ1 306 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 TUBD1Q9UJT1 453 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 ATMQ13315 3056 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 AHCTF1Q8WYP5 2266 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF462Q96JM2 2506 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 TOX3O15405 576 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 SNX2O60749 519 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 KCNJ13O60928 360 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 KRT1P04264 644 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 TPM1P09493 284 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 KCNC4Q03721 635 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 ABHD18Q0P651 414 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 CLCA4Q14CN2 919 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 PRKD1Q15139 912 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 AGAP9Q5VTM2 703 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 CCDC70Q6NSX1 233 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 BORAQ6PGQ7 559 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 ABRAXAS1Q6UWZ7 409 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 NPNTQ6UXI9 565 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 LRRTM4Q86VH4 590 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 RFX6Q8HWS3 928 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 VSTM4Q8IW00 320 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 RBM12BQ8IXT5 1001 aaKnown RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 NLGN4XQ8N0W4 816 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 NLGN4YQ8NFZ3 816 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 TEKT5Q96M29 485 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 AGAP3Q96P47 875 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 CHP1Q99653 195 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 GPR63Q9BZJ6 419 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 KLC4Q9NSK0 619 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 A0A0A6YYK5 440 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 TERTO14746 1132 aaKnown RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 SUV39H1O43463 412 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 FAM87AP0C7U9 286 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 BPIP17213 487 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 CSRP3P50461 194 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 CYP4F2P78329 520 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 TFDP2Q14188 446 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 TMEM26Q6ZUK4 368 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 JPH3Q8WXH2 748 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 CCDC42Q96M95 316 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 TBC1D10AQ9BXI6 508 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 SLC25A18Q9H1K4 315 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 TRABDQ9H4I3 376 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 SIDT1Q9NXL6 827 aaKnown RBP11.3□□□□□ -0.6
SCFD1-206ENST00000484733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.3□□□□□ -0.65e-7■■■□□ 17.9
SCFD1-206ENST00000484733 OGFRQ9NZT2 677 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 SLC23A2Q9UGH3 650 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 SHOC2Q9UQ13 582 aa11.3□□□□□ -0.6
SCFD1-206ENST00000484733 LOC285095A0A1B0GVY8 99 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 A8MU76 341 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 MTSS1O43312 755 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 MFAP3LO75121 409 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 DLGAP3O95886 979 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 EPOP01588 193 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 PTPN3P26045 913 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 HADHBP55084 474 aaKnown RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 SNAP47Q5SQN1 464 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF648Q5T619 568 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 ZDHHC20Q5W0Z9 365 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 ALS2CLQ60I27 953 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 MFSD7Q6UXD7 560 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 ATG14Q6ZNE5 492 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 BRSK1Q8TDC3 778 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 RNF25Q96BH1 459 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 CEP41Q9BYV8 373 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 POT1Q9NUX5 634 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms