RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 LGALS16A8MUM7 142 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 H3BRJ5 948 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 CHUKO15111 745 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 FTLP02792 175 aaPredicted RBP12.69□□□□□ -0.38
UBR4-213ENST00000483922 PYGLP06737 847 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 MMP2P08253 660 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 CD48P09326 243 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 ATP1A3P13637 1013 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 FOLR1P15328 257 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 CDH6P55285 790 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 BECN1Q14457 450 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 QPCTQ16769 361 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 KHDC1Q4VXA5 237 aaKnown RBP12.69□□□□□ -0.38
UBR4-213ENST00000483922 ZNF571Q7Z3V5 609 aaPredicted RBP12.69□□□□□ -0.38
UBR4-213ENST00000483922 ADGRG6Q86SQ4 1221 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 RASGRP3Q8IV61 690 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 HSPH1Q92598 858 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 STAMBPL1Q96FJ0 436 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 TCTN2Q96GX1 697 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 BRD8Q9H0E9 1235 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 CARD9Q9H257 536 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 FAM83DQ9H4H8 585 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 ACTL8Q9H568 366 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 RMI1Q9H9A7 625 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 LNPEPQ9UIQ6 1025 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 KCND3Q9UK17 655 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 PCSK5Q92824 1860 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 DOPEY1Q5JWR5 2465 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 MED13Q9UHV7 2174 aa12.69□□□□□ -0.38
UBR4-213ENST00000483922 ANKRD17O75179 2603 aaKnown RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 IGHV5-51A0A0C4DH38 117 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 OR5K4A6NMS3 321 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 DDX3XO00571 662 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBR4-213ENST00000483922 TOX3O15405 576 aaPredicted RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 FERP16591 822 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 NELFEP18615 380 aaKnown RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 NFKBIAP25963 317 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 PCK1P35558 622 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 DCTP40126 519 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 GARSP41250 739 aaKnown RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 CCL11P51671 97 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 ZNF135P52742 658 aaPredicted RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 UBXN1Q04323 297 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 ITKQ08881 620 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 IL10RAQ13651 578 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 KCNAB1Q14722 419 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 INPP5JQ15735 1006 aaPredicted RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 UGT8Q16880 541 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 LCN10Q6JVE6 187 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 FAM92BQ6ZTR7 304 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 PRSS42Q7Z5A4 293 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 CPNE8Q86YQ8 564 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 RAVER1Q8IY67 606 aaKnown RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 ATPAF2Q8N5M1 289 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 SLC38A9Q8NBW4 561 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 GPR26Q8NDV2 337 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 PCMTD1Q96MG8 357 aaPredicted RBP12.68□□□□□ -0.38
UBR4-213ENST00000483922 OR2AG1Q9H205 316 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 SLC40A1Q9NP59 571 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBR4-213ENST00000483922 LUZP4Q9P127 313 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 SEMA5BQ9P283 1151 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 WDR37Q9Y2I8 494 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 OTOGQ6ZRI0 2925 aa12.68□□□□□ -0.38
UBR4-213ENST00000483922 OR52A4PA6NMU1 304 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 MATN3O15232 486 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 MFSD11O43934 449 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 CCNYL3P0C7X3 344 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 RPL10P27635 214 aaKnown RBP12.67□□□□□ -0.38
UBR4-213ENST00000483922 ARSEP51690 589 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 SLC25A11Q02978 314 aaKnown RBP12.67□□□□□ -0.38
UBR4-213ENST00000483922 GPR18Q14330 331 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 SEPT7Q16181 437 aaKnown RBP12.67□□□□□ -0.38
UBR4-213ENST00000483922 PLA2G4EQ3MJ16 856 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBR4-213ENST00000483922 ATP13A4Q4VNC1 1196 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 BOLA3Q53S33 107 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 CACHD1Q5VU97 1274 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 FAM69BQ5VUD6 431 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 ABRAXAS1Q6UWZ7 409 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 C11orf96Q7Z7L8 435 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 BBS5Q8N3I7 341 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 LPCAT1Q8NF37 534 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 FAM71BQ8TC56 605 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 C19orf60Q96EN9 201 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 BTBD6Q96KE9 485 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 POLR1EQ9GZS1 481 aaKnown RBP12.67□□□□□ -0.38
UBR4-213ENST00000483922 STN1Q9H668 368 aaKnown RBP12.67□□□□□ -0.38
UBR4-213ENST00000483922 HAUS4Q9H6D7 363 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 TRIM39Q9HCM9 518 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 CASS4Q9NQ75 786 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 RBM22Q9NW64 420 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBR4-213ENST00000483922 CUEDC1Q9NWM3 386 aaPredicted RBP12.67□□□□□ -0.38
UBR4-213ENST00000483922 EPHA6Q9UF33 1036 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 ERRFI1Q9UJM3 462 aaPredicted RBP12.67□□□□□ -0.38
UBR4-213ENST00000483922 HIVEP3Q5T1R4 2406 aa12.67□□□□□ -0.38
UBR4-213ENST00000483922 C1orf232A0A0U1RR37 186 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms