RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PIK3CAP42336 1068 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 HOXA1P49639 335 aaPredicted RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 RAD23BP54727 409 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 CASP6P55212 293 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 CDC16Q13042 620 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 ODF2Q5BJF6 829 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 RILPL1Q5EBL4 403 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 TMEM81Q6P7N7 255 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 FAM171BQ6P995 826 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 SLC22A25Q6T423 547 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 LRRC8DQ7L1W4 858 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 ENOSF1Q7L5Y1 443 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 SNX32Q86XE0 403 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 LMNTD2Q8IXW0 634 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 SRBD1Q8N5C6 995 aaKnown RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 C11orf65Q8NCR3 313 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 CADM4Q8NFZ8 388 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 TDRD7Q8NHU6 1098 aaKnown RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 ST8SIA4Q92187 359 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 NSUN4Q96CB9 384 aaKnown RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 ST6GAL2Q96JF0 529 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 TSPAN18Q96SJ8 248 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 LBHD1Q9BQE6 289 aaPredicted RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 ADPGKQ9BRR6 497 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 PAIP1Q9H074 479 aaKnown RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 PDCL3Q9H2J4 239 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 HINT3Q9NQE9 182 aaKnown RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 KRT84Q9NSB2 600 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 C20orf141Q9NUB4 165 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 EPS15L1Q9UBC2 864 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 VPS28Q9UK41 221 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZHX1Q9UKY1 873 aaPredicted RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 SNX5Q9Y5X3 404 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 SMCHD1A6NHR9 2005 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 COL2A1P02458 1487 aaPredicted RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 P4HA2O15460 535 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 TFP02787 698 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 DNTTP04053 509 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 GLULP15104 373 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 AKR1B1P15121 316 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 ATP6V1B1P15313 513 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 DDX5P17844 614 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 HOXC13P31276 330 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 PSMC2P35998 433 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 SORDQ00796 357 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 WASHC5Q12768 1159 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 EIF4A2Q14240 407 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 KRT32Q14532 448 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZNF234Q14588 700 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 RNPS1Q15287 305 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 NFIL3Q16649 462 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 HIST2H2ACQ16777 129 aaPredicted RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 SLC10A5Q5PT55 438 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 CCNYL2Q5T2Q4 361 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 SLC9C2Q5TAH2 1124 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZC2HC1BQ5TFG8 222 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 HAUS3Q68CZ6 603 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 TXNDC8Q6A555 127 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 ACAD10Q6JQN1 1059 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 METTL2BQ6P1Q9 378 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 DUS1LQ6P1R4 473 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 SLC27A1Q6PCB7 646 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 C11orf88Q6PI97 169 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 RAD9BQ6WBX8 426 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 TMTC3Q6ZXV5 915 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 PRPF39Q86UA1 669 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 VSIG1Q86XK7 387 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 TEX11Q8IYF3 940 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 NGEFQ8N5V2 710 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 TEX9Q8N6V9 391 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 PCDH20Q8N6Y1 951 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 ANKRD52Q8NB46 1076 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 CCDC191Q8NCU4 936 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 ADAD2Q8NCV1 583 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 MSANTD4Q8NCY6 345 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 PIGTQ969N2 578 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 RHBDF1Q96CC6 855 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 METTL2AQ96IZ6 378 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 RADILQ96JH8 1075 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 SH3GL2Q99962 352 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 SLF1Q9BQI6 1058 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 TXLNGYQ9BZA5 131 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 SYNCQ9H7C4 482 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 DBNDD1Q9H9R9 158 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 UPF2Q9HAU5 1272 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 HAUS2Q9NVX0 235 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 GIMAP2Q9UG22 337 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 CNOT7Q9UIV1 285 aaKnown RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 HSF4Q9ULV5 492 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 TBX20Q9UMR3 447 aa2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 RSF1Q96T23 1441 aaPredicted RBP2.93□□□□□ -1.94
LAPTM4A-202ENST00000483117 KAT6BQ8WYB5 2073 aa2.92□□□□□ -1.94
LAPTM4A-202ENST00000483117 GOLGA6L10A0A0M3HER8 536 aa2.92□□□□□ -1.94
LAPTM4A-202ENST00000483117 CTAGE9A4FU28 777 aa2.92□□□□□ -1.94
LAPTM4A-202ENST00000483117 SMIM1B2RUZ4 78 aa2.92□□□□□ -1.94
LAPTM4A-202ENST00000483117 BLOC1S5-TXNDC5H3BN57 136 aa2.92□□□□□ -1.94
LAPTM4A-202ENST00000483117 GUCY1B2O75343 617 aa2.92□□□□□ -1.94
LAPTM4A-202ENST00000483117 FTCDO95954 541 aa2.92□□□□□ -1.94
LAPTM4A-202ENST00000483117 IGHV4-39P01824 125 aa2.92□□□□□ -1.94
LAPTM4A-202ENST00000483117 INHBAP08476 426 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms