RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 KCNAB1Q14722 419 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ARHGAP19Q14CB8 494 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ZMYND11Q15326 602 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 TAF1BQ53T94 588 aaPredicted RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 SGO1Q5FBB7 561 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 FNDC7Q5VTL7 733 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 LIPMQ5VYY2 423 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 JADE1Q6IE81 842 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SULT1C3Q6IMI6 304 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 MRNIPQ6NTE8 343 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 METAP1DQ6UB28 335 aaPredicted RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 AFTPHQ6ULP2 937 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 RBM43Q6ZSC3 357 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 MRPL10Q7Z7H8 261 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 AACSQ86V21 672 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ABRAQ8N0Z2 381 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 FSTL5Q8N475 847 aaPredicted RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 TMEM116Q8NCL8 245 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 OR8J1Q8NGP2 316 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 FAM76AQ8TAV0 307 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 DNAJB14Q8TBM8 379 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 DDI1Q8WTU0 396 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 LIPHQ8WWY8 451 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ASB10Q8WXI3 467 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 LPIN2Q92539 896 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 RSC1A1Q92681 617 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 NT5C3BQ969T7 300 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 LRRC39Q96DD0 335 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 PHF21BQ96EK2 531 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SAT2Q96F10 170 aaPredicted RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 COQ10AQ96MF6 247 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 EIF3CQ99613 913 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 TRIM62Q9BVG3 475 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ALG8Q9BVK2 526 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 TBC1D10AQ9BXI6 508 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 OSBPL8Q9BZF1 889 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 RIBC2Q9H4K1 309 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 LY9Q9HBG7 655 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SPACA1Q9HBV2 294 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 GBA2Q9HCG7 927 aaPredicted RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 NRBP2Q9NSY0 501 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 RAB20Q9NX57 234 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 EHD2Q9NZN4 543 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 KCND2Q9NZV8 630 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ANKFY1Q9P2R3 1169 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 CHRNA9Q9UGM1 479 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ATP6V1HQ9UI12 483 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SERTAD3Q9UJW9 196 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ANGPTL2Q9UKU9 493 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 DNPEPQ9ULA0 475 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 CDH7Q9ULB5 785 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SNX6Q9UNH7 406 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SH2B3Q9UQQ2 575 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 BTBD3Q9Y2F9 522 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 TDRKHQ9Y2W6 561 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 MRPS2Q9Y399 296 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 PCDHB2Q9Y5E7 798 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 HS3ST3A1Q9Y663 406 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SPACA6W5XKT8 324 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SALL3Q9BXA9 1300 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 FER1L4A9Z1Z3 1794 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 A0A1W2PN81 502 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TTC26A0AVF1 554 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TARSL2A2RTX5 802 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 FAM90A7PA6NKC0 464 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ZNF716A6NP11 495 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 FAM90A22PA8MWA6 464 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 FAM90A12PA8MX19 464 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 FAM90A23PA8MXZ1 464 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 HSBP1L1C9JCN9 74 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 J3KTA2 159 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SLC33A1O00400 549 aaPredicted RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 YY2O15391 372 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SLC16A3O15427 465 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 PAPSS1O43252 624 aaPredicted RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 DHHO43323 396 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 EXTL3O43909 919 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TULP3O75386 442 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 TAF5LO75529 589 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 RHBDL1O75783 438 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SIX3O95343 332 aaPredicted RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 GNA14O95837 355 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 PCCBP05166 539 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 FAM58BPP0C7Q3 252 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ZNF735P0CB33 412 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 HSPA8P11142 646 aaKnown RBP4.13□□□□□ -1.75
VPS41-212ENST00000482217 ODC1P11926 461 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ERCC2P18074 760 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ADRA1DP25100 572 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 EPHA3P29320 983 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SLC5A2P31639 672 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 NF2P35240 595 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 SLC16A2P36021 539 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 CHRNA7P36544 502 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 AVPR1BP47901 424 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 CCR3P51677 355 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 ARSEP51690 589 aa4.13□□□□□ -1.75
VPS41-212ENST00000482217 HNRNPMP52272 730 aaKnown RBP eCLIP4.13□□□□□ -1.75
VPS41-212ENST00000482217 HMGA2P52926 109 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms