RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 CDKN1CP49918 316 aaPredicted RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 ARSDP51689 593 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 CLDN6P56747 220 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 HNRNPKP61978 463 aaKnown RBP eCLIP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 CRADDP78560 199 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 MRPS25P82663 173 aaKnown RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 GPS1Q13098 491 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 PEX6Q13608 980 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 SEPT6Q14141 434 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 SUZ12Q15022 739 aaKnown RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 TRIP6Q15654 476 aaKnown RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 ADGRG6Q86SQ4 1221 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 SLCO6A1Q86UG4 719 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 KLHL7Q8IXQ5 586 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 OR4C6Q8NH72 309 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 BRSK1Q8TDC3 778 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 CPT1BQ92523 772 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 GLYATL1Q969I3 302 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 SCARF2Q96GP6 870 aaPredicted RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 CRELD1Q96HD1 420 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 CNDP2Q96KP4 475 aaKnown RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 ZNF778Q96MU6 729 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 PLEKHG4BQ96PX9 1271 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 SRPK1Q96SB4 655 aaKnown RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 NAP1L3Q99457 506 aaPredicted RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 SLC13A1Q9BZW2 595 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 FAM96AQ9H5X1 160 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 CARS2Q9HA77 564 aaKnown RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 EIF2B3Q9NR50 452 aaKnown RBP10.48□□□□□ -0.73
SSBP1-210ENST00000481508 ATXN10Q9UBB4 475 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 SPASTQ9UBP0 616 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 SLC2A6Q9UGQ3 507 aa10.48□□□□□ -0.73
SSBP1-210ENST00000481508 PTPRQQ9UMZ3 2332 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 ATMQ13315 3056 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 GLYATL1P3A0A0U1RQE8 302 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 MROH6A6NGR9 719 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 OR51F1A6NGY5 319 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 ERI2A8K979 691 aaKnown RBP10.47□□□□□ -0.73
SSBP1-210ENST00000481508 E7EVH7 732 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 TNFRSF10CO14798 259 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 STX7O15400 261 aaKnown RBP10.47□□□□□ -0.73
SSBP1-210ENST00000481508 C1QL1O75973 258 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 CAPNS1P04632 268 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 FTH1P19P0C7X4 201 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 KELP23276 732 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 AK4P27144 223 aaPredicted RBP10.47□□□□□ -0.73
SSBP1-210ENST00000481508 CASQ1P31415 396 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 ACTN2P35609 894 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 MAGEA6P43360 314 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 SIM1P81133 766 aaPredicted RBP10.47□□□□□ -0.73
SSBP1-210ENST00000481508 C2orf54Q08AI8 447 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 PYCR3Q53H96 274 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 PPP1R21Q6ZMI0 780 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 GLRX5Q86SX6 157 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 AGGF1Q8N302 714 aaeCLIP10.47□□□□□ -0.73
SSBP1-210ENST00000481508 MPP5Q8N3R9 675 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 ANKK1Q8NFD2 765 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 OR13J1Q8NGT2 312 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 BTN2A2Q8WVV5 523 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 APOLD1Q96LR9 279 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 TBATAQ96M53 351 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 TRIM56Q9BRZ2 755 aaKnown RBP10.47□□□□□ -0.73
SSBP1-210ENST00000481508 TRIM51Q9BSJ1 452 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 ZSCAN5AQ9BUG6 496 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 OR2AG1Q9H205 316 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 SLC32A1Q9H598 525 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 NLGN3Q9NZ94 848 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 SIRPGQ9P1W8 387 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 FTSJ1Q9UET6 329 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 NEUROG3Q9Y4Z2 214 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 CSNK1G3Q9Y6M4 447 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 COL12A1Q99715 3063 aa10.47□□□□□ -0.73
SSBP1-210ENST00000481508 GOLGA6L10A0A0M3HER8 536 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 EIF4E1BA6NMX2 242 aaKnown RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 C2orf81A6NN90 581 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 LMO7DNF2Z398 122 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 AVILO75366 819 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 SRP72O76094 671 aaKnown RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 PRAMEF1O95521 474 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 ASMTLO95671 621 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 ECEL1O95672 775 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 CRTAMO95727 393 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 LDOC1O95751 146 aaPredicted RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 EML2O95834 649 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 PYGLP06737 847 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 TPSB2P20231 275 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 PSMA3P25788 255 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 MGAT1P26572 445 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 ADCY8P40145 1251 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 ACADVLP49748 655 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 SESN2P58004 480 aaPredicted RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 CTBSQ01459 385 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 CDH17Q12864 832 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 PTK6Q13882 451 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 TPSAB1Q15661 275 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 PLA2G4EQ3MJ16 856 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 CRTC3Q6UUV7 619 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 LINC00523Q86TU6 105 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 MARCH9Q86YJ5 346 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 ZNF547Q8IVP9 402 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms