RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 NCAPGQ9BPX3 1015 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 TMEM47Q9BQJ4 181 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 NUDT16L1Q9BRJ7 211 aaKnown RBP5.07□□□□□ -1.6
RFC4-212ENST00000479307 TKTL2Q9H0I9 626 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 POLR1BQ9H9Y6 1135 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 PLAC1Q9HBJ0 212 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 TMEM51Q9NW97 253 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 ELOVL5Q9NYP7 299 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 TBC1D29Q9UFV1 150 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 SCN9AQ15858 1988 aa5.07□□□□□ -1.6
RFC4-212ENST00000479307 COL3A1P02461 1466 aaPredicted RBP5.07□□□□□ -1.6
RFC4-212ENST00000479307 ANKRD36CQ5JPF3 1778 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 NCOR1O75376 2440 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 ASTN2O75129 1339 aaPredicted RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 FAM237AA0A1B0GTK4 181 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 RPS10-NUDT3A0A1W2PQS6 291 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 TMEM202A6NGA9 273 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 HCRTR2O43614 444 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 SLC25A12O75746 678 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 RARGP13631 454 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 DDX5P17844 614 aaKnown RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 RPS12P25398 132 aaKnown RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 KCNJ4P48050 445 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 RFX2P48378 723 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 F2RL1P55085 397 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 NLRP5P59047 1200 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 ZBED6P86452 979 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 MC1RQ01726 317 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 SP3Q02447 781 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 CREB5Q02930 508 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 NEDD9Q14511 834 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 WTAPQ15007 396 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 COL28A1Q2UY09 1125 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 DUSP28Q4G0W2 176 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 DNTTIP2Q5QJE6 756 aaKnown RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 QSOX2Q6ZRP7 698 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 Q6ZTK2 550 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 ZNF367Q7RTV3 350 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 ZNF575Q86XF7 245 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 WDR63Q8IWG1 891 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 WDTC1Q8N5D0 677 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 AGBL3Q8NEM8 1001 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 FAM120BQ96EK7 910 aaKnown RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 HMCESQ96FZ2 354 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 CMTM3Q96MX0 182 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 ZNF570Q96NI8 536 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 WDFY2Q96P53 400 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 MMTAG2Q9BU76 263 aaKnown RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 IFIH1Q9BYX4 1025 aaKnown RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 PDZD7Q9H5P4 517 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 DDX4Q9NQI0 724 aaKnown RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 CISD1Q9NZ45 108 aaKnown RBP5.06□□□□□ -1.6
RFC4-212ENST00000479307 ERVK-11Q9UQG0 969 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 SLC45A1Q9Y2W3 748 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 SESN1Q9Y6P5 492 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 NUP98P52948 1817 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 WDFY4Q6ZS81 3184 aa5.06□□□□□ -1.6
RFC4-212ENST00000479307 IBTKQ9P2D0 1353 aaPredicted RBP5.05□□□□□ -1.6
RFC4-212ENST00000479307 HEG1Q9ULI3 1381 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 FRMD3A2A2Y4 597 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 AGAP14A8MT82 685 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 KDM4EB2RXH2 506 aaPredicted RBP5.05□□□□□ -1.6
RFC4-212ENST00000479307 SPRY3O43610 288 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 PSG1P11464 419 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 NAGAP17050 411 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 THPOP40225 353 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 HADHAP40939 763 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 UBA7P41226 1012 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 NR4A2P43354 598 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 TFAP4Q01664 338 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 ROR2Q01974 943 aaKnown RBP5.05□□□□□ -1.6
RFC4-212ENST00000479307 PPATQ06203 517 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 NAE1Q13564 534 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 ADIPOQQ15848 244 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 SOWAHCQ53LP3 525 aaPredicted RBP5.05□□□□□ -1.6
RFC4-212ENST00000479307 RILPL1Q5EBL4 403 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 PLEKHS1Q5SXH7 462 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 Q6ZSV7 163 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 C1QL2Q7Z5L3 287 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 HACE1Q8IYU2 909 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 TRIB2Q92519 343 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 URB1-AS1Q96HZ7 61 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 APOLD1Q96LR9 279 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 HARBI1Q96MB7 349 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 SMARCAD1Q9H4L7 1026 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 CLK4Q9HAZ1 481 aaKnown RBP5.05□□□□□ -1.6
RFC4-212ENST00000479307 PAM16Q9Y3D7 125 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 RABGAP1Q9Y3P9 1069 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 ATP6V0A2Q9Y487 856 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 CEPT1Q9Y6K0 416 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 STON1Q9Y6Q2 735 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 MAU2Q9Y6X3 613 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 TTC3P53804 2025 aa5.05□□□□□ -1.6
RFC4-212ENST00000479307 RTL9Q8NET4 1388 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 MUC6Q6W4X9 2439 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 OTOFQ9HC10 1997 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 FAM90A8PA6NJQ4 464 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 B4DGG1 531 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 AKR1B15C9JRZ8 316 aaPredicted RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 I6L893 689 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms