RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ERC1Q8IUD2 1116 aa2.8□□□□□ -1.96
HPS3-205ENST00000478525 LINC00612Q8N6U2 182 aa2.8□□□□□ -1.96
HPS3-205ENST00000478525 OXNAD1Q96HP4 312 aaPredicted RBP2.8□□□□□ -1.96
HPS3-205ENST00000478525 PRAC1Q96KF2 57 aa2.8□□□□□ -1.96
HPS3-205ENST00000478525 AGAP3Q96P47 875 aa2.8□□□□□ -1.96
HPS3-205ENST00000478525 DNAJB4Q9UDY4 337 aa2.8□□□□□ -1.96
HPS3-205ENST00000478525 A4GNTQ9UNA3 340 aa2.8□□□□□ -1.96
HPS3-205ENST00000478525 SCINQ9Y6U3 715 aa2.8□□□□□ -1.96
HPS3-205ENST00000478525 PLOD2O00469 737 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 ANKRD28O15084 1053 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 IRAK2O43187 625 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 WISP2O76076 250 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 EDN1P05305 212 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 ITGA3P26006 1051 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 SLC6A12P48065 614 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 PAPOLAP51003 745 aaKnown RBP2.79□□□□□ -1.96
HPS3-205ENST00000478525 SNRPD1P62314 119 aaKnown RBP2.79□□□□□ -1.96
HPS3-205ENST00000478525 GTDC1Q4AE62 458 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 SLC22A25Q6T423 547 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 Q75L30 129 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 DPPA4Q7L190 304 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 CACNA2D4Q7Z3S7 1137 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 ZNF843Q8N446 348 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 PPP1R13BQ96KQ4 1090 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 H2AFJQ9BTM1 129 aa2.79□□□□□ -1.96
HPS3-205ENST00000478525 CROCCQ5TZA2 2017 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 IGLV7-46A0A075B6I9 117 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 TEX13CA0A0J9YWL9 993 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 PRR32B1ATL7 298 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 H0YIN7 160 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 RTL8CO15255 209 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 KCNN4O15554 427 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 EML2O95834 649 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 LIFP15018 202 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 WNT5AP41221 380 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 GABRB2P47870 512 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 CDH15P55291 814 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 SNX16P57768 344 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 SLC12A1Q13621 1099 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 COL28A1Q2UY09 1125 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 USP41Q3LFD5 358 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 PAPD4Q6PIY7 484 aaKnown RBP2.78□□□□□ -1.96
HPS3-205ENST00000478525 PACS1Q6VY07 963 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 MRGPRDQ8TDS7 321 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 PRMT6Q96LA8 375 aaPredicted RBP2.78□□□□□ -1.96
HPS3-205ENST00000478525 ACOX2Q99424 681 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 FGFBP2Q9BYJ0 223 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 INTS2Q9H0H0 1204 aaKnown RBP2.78□□□□□ -1.96
HPS3-205ENST00000478525 ZNF700Q9H0M5 742 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 APOBEC3GQ9HC16 384 aaKnown RBP2.78□□□□□ -1.96
HPS3-205ENST00000478525 KLK13Q9UKR3 277 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 HSF4Q9ULV5 492 aa2.78□□□□□ -1.96
HPS3-205ENST00000478525 PRRC2AP48634 2157 aaKnown RBP2.78□□□□□ -1.96
HPS3-205ENST00000478525 LDLRAD4O15165 306 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 NBNO60934 754 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 HMBSP08397 361 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 HOXB5P09067 269 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 ANXA7P20073 488 aaKnown RBP2.77□□□□□ -1.97
HPS3-205ENST00000478525 UGT1A1P22309 533 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 KRTAP10-1P60331 282 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 MAD2L1Q13257 205 aaPredicted RBP2.77□□□□□ -1.97
HPS3-205ENST00000478525 ALG11Q2TAA5 492 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 C6orf141Q5SZD1 244 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 MAP3K21Q5TCX8 1036 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 ATG16L1Q676U5 607 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 Q6ZSR9 355 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 CCDC13Q8IYE1 715 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 NOC3LQ8WTT2 800 aaKnown RBP2.77□□□□□ -1.97
HPS3-205ENST00000478525 DNAAF4Q8WXU2 420 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 SLX1AQ9BQ83 275 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 TMEM47Q9BQJ4 181 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 PCGF1Q9BSM1 259 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 PCGF6Q9BYE7 350 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 USP44Q9H0E7 712 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 VEZTQ9HBM0 779 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 LTB4R2Q9NPC1 389 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 SLC38A7Q9NVC3 462 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 HCN3Q9P1Z3 774 aa2.77□□□□□ -1.97
HPS3-205ENST00000478525 UTYO14607 1347 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 GAGE10A6NGK3 116 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 ANKRD66B4E2M5 251 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 SLCO1B7G3V0H7 640 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 PPM1GO15355 546 aaPredicted RBP2.76□□□□□ -1.97
HPS3-205ENST00000478525 PLIN1O60240 522 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 TRMUO75648 421 aaKnown RBP2.76□□□□□ -1.97
HPS3-205ENST00000478525 NGFP01138 241 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 TFAP2AP05549 437 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 NFKBIAP25963 317 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 KCNJ10P78508 379 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 NFIL3Q16649 462 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 ARHGEF16Q5VV41 709 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 ALS2CLQ60I27 953 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 TRIM65Q6PJ69 517 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 RRM2BQ7LG56 351 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 ISCA2Q86U28 154 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 ZNF611Q8N823 705 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 RDM1Q8NG50 284 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms