RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 VIPP01282 170 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 MPSTP25325 297 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 MAP4P27816 1152 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 UGT1A3P35503 534 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 DYNLT1P63172 113 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 MC1RQ01726 317 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 NFATC3Q12968 1075 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 PCSK7Q16549 785 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 SNAP47Q5SQN1 464 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 BORAQ6PGQ7 559 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 CPNE8Q86YQ8 564 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 VSTM4Q8IW00 320 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 NLGN4XQ8N0W4 816 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 CNTD1Q8N815 330 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 NLGN4YQ8NFZ3 816 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 TFB1MQ8WVM0 346 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 NKD1Q969G9 470 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 TTC25Q96NG3 672 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 TRIB3Q96RU7 358 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 VAT1Q99536 393 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 TIMM29Q9BSF4 260 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 KLC4Q9NSK0 619 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 POT1Q9NUX5 634 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 HACD3Q9P035 362 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 ATXN10Q9UBB4 475 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 CNOT6Q9ULM6 557 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 SHOC2Q9UQ13 582 aa14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMARCE1-209ENST00000478349 MGAQ8IWI9 3026 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 MN1Q10571 1320 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 A6NCN8 305 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 TOX3O15405 576 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 KCNJ13O60928 360 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 ANKRD34CP0C6C1 535 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 ZNF8P17098 575 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 HALP42357 657 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 MC2RQ01718 297 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 IHHQ14623 411 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 TEX44Q53QW1 395 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 ANKS6Q68DC2 871 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 KDELC2Q7Z4H8 507 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 ARHGAP22Q7Z5H3 698 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 TMC3Q7Z5M5 1100 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 ZNF761Q86XN6 746 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 GDAP1Q8TB36 358 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 BRSK1Q8TDC3 778 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 JPH3Q8WXH2 748 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 RNF25Q96BH1 459 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 VPS35Q96QK1 796 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 WDR24Q96S15 920 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 GPN2Q9H9Y4 310 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 GLOD4Q9HC38 313 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 FBXO8Q9NRD0 319 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 SPTLC3Q9NUV7 552 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 TMEM9Q9P0T7 183 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 FAM153AQ9UHL3 310 aa14.26□□□□□ -0.13
SMARCE1-209ENST00000478349 C3orf70A6NLC5 250 aaPredicted RBP14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 A8MU76 341 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 CHUKO15111 745 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 POLR1CO15160 346 aaPredicted RBP14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 CDK14O94921 469 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 FAM87AP0C7U9 286 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 TNNT1P13805 278 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 ZNF7P17097 686 aaPredicted RBP14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 XRCC1P18887 633 aaPredicted RBP14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 IDSP22304 550 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 TCEAL1Q15170 157 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 TBR1Q16650 682 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 CRTC3Q6UUV7 619 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 ATG14Q6ZNE5 492 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 GPR26Q8NDV2 337 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 LRRN4Q8WUT4 740 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 P3H4Q92791 437 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 CXorf40BQ96DE9 158 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 TEKT5Q96M29 485 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 CEP41Q9BYV8 373 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 TSPY26PQ9H489 355 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 CLMPQ9H6B4 373 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 STARD5Q9NSY2 213 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 GEMIN8Q9NWZ8 242 aaKnown RBP14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 OCIAD1Q9NX40 245 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 KLHL8Q9P2G9 620 aaPredicted RBP14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 TUBD1Q9UJT1 453 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 COL6A6A6NMZ7 2263 aa14.25□□□□□ -0.13
SMARCE1-209ENST00000478349 AKR1B15C9JRZ8 316 aaPredicted RBP14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 PMPCBO75439 489 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 ZNF189O75820 626 aaPredicted RBP14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 UBXN7O94888 489 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 EML2O95834 649 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 EPOP01588 193 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 PIRTP0C851 137 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 LIFP15018 202 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 AMD1P17707 334 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 HMGCLP35914 325 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 CCR10P46092 362 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 UBE2IP63279 158 aaKnown RBP14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 KCNC4Q03721 635 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 ABHD18Q0P651 414 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 SRSF6Q13247 344 aaKnown RBP14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 PRKD1Q15139 912 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms