RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 TRIM49BA6NDI0 452 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 C3orf70A6NLC5 250 aaPredicted RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 CCT8L1PA6NM43 557 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 LRRC53A6NM62 1247 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 FOXO6A8MYZ6 492 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 MIF4GDA9UHW6 222 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 KLRF2D3W0D1 207 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 CETN3O15182 167 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 HNRNPCL1O60812 293 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 PALMO75781 387 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 NFATC1O95644 943 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 KLKB1P03952 638 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 ALDOAP04075 364 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 HOXC6P09630 235 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 ALDOCP09972 364 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 FGF3P11487 239 aaPredicted RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 VEGFAP15692 232 aaPredicted RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 HOXA11P31270 313 aaPredicted RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 HSD17B3P37058 310 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 EPS15P42566 896 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 HSPA7P48741 367 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 RASSF2P50749 326 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 HADHBP55084 474 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 TAS2R50P59544 299 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 TLE3Q04726 772 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 KLHL30Q0D2K2 578 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 STK4Q13043 487 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 TNIP1Q15025 636 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 NFIL3Q16649 462 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 TDRD12Q587J7 1177 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 HMBOX1Q6NT76 420 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 NFRKBQ6P4R8 1299 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 MOXD1Q6UVY6 613 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 PIGWQ7Z7B1 504 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 CCDC65Q8IXS2 484 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 AGBL3Q8NEM8 1001 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 DEPTORQ8TB45 409 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 IFT81Q8WYA0 676 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 KAT2AQ92830 837 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 KIAA1191Q96A73 305 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 TLCD1Q96CP7 247 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 RRP36Q96EU6 259 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 MED30Q96HR3 178 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 TRIM6Q9C030 488 aaPredicted RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 UBA5Q9GZZ9 404 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 CARD9Q9H257 536 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 PABPC3Q9H361 631 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 DNAJC18Q9H819 358 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 PPCSQ9HAB8 311 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 HIF1ANQ9NWT6 349 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 MTRF1LQ9UGC7 380 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 SEC63Q9UGP8 760 aaKnown RBP4.68□□□□□ -1.66
LMBR1-216ENST00000477983 SLC12A4Q9UP95 1085 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 PFASO15067 1338 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 MYH7BA7E2Y1 1941 aa4.68□□□□□ -1.66
LMBR1-216ENST00000477983 PSME4Q14997 1843 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 PLIN4Q96Q06 1357 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 PDXKO00764 312 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 CYTH3O43739 400 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 CALUO43852 315 aaPredicted RBP4.67□□□□□ -1.66
LMBR1-216ENST00000477983 CCNT1O60563 726 aaKnown RBP4.67□□□□□ -1.66
LMBR1-216ENST00000477983 TCEA3O75764 348 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 H2AFZP0C0S5 128 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 PDHBP11177 359 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 EEF2P13639 858 aaKnown RBP4.67□□□□□ -1.66
LMBR1-216ENST00000477983 FERP16591 822 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 MUTP22033 750 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 CASP1P29466 404 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 CHRNA3P32297 505 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 MAN1A1P33908 653 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 MATR3P43243 847 aaKnown RBP eCLIP4.67□□□□□ -1.666e-8■■■■■ 28.8
LMBR1-216ENST00000477983 NOVP48745 357 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 SLC18A1P54219 525 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 PTENP60484 403 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 CAV1Q03135 178 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 SHROOM1Q2M3G4 852 aaPredicted RBP4.67□□□□□ -1.66
LMBR1-216ENST00000477983 ZCWPW2Q504Y3 356 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 Q5PR19 223 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 WASHC2DQ5SRD0 308 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 TATDN1Q6P1N9 297 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 TMEM88Q6PEY1 159 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 PARM1Q6UWI2 310 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 H2AFVQ71UI9 128 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 TRILQ7L0X0 811 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 PEX26Q7Z412 305 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 TRABD2AQ86V40 505 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 LRRC57Q8N9N7 239 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 KIAA0895Q8NCT3 520 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 ELP5Q8TE02 316 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 HDAC7Q8WUI4 952 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 FAM151AQ8WW52 585 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 MAIP1Q8WWC4 291 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 RAD54LQ92698 747 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 C18orf8Q96DM3 657 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 URB1-AS1Q96HZ7 61 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 CCDC138Q96M89 665 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 RAB3IPQ96QF0 476 aaPredicted RBP4.67□□□□□ -1.66
LMBR1-216ENST00000477983 MTMR9Q96QG7 549 aa4.67□□□□□ -1.66
LMBR1-216ENST00000477983 XPO6Q96QU8 1125 aaKnown RBP4.67□□□□□ -1.66
LMBR1-216ENST00000477983 PIGSQ96S52 555 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms