RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 CALML4Q96GE6 196 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 FAM84BQ96KN1 310 aaPredicted RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 CTAGE1Q96RT6 745 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 SEMA3CQ99985 751 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 EBF2Q9HAK2 575 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 B3GALT5Q9Y2C3 310 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 OR2W1Q9Y3N9 320 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 RUSC2Q8N2Y8 1516 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 A0A1W2PQ09 198 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 hCG_1807616A0A1W2PRN6 198 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 PRAC2D3DTV9 90 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TMEM178BH3BS89 294 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TULP2O00295 520 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 SMAD9O15198 467 aaKnown RBP3.25□□□□□ -1.89
TARDBP-208ENST00000477447 KCNN4O15554 427 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 BUB3O43684 328 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TSPAN9O75954 239 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 CSH1P0DML2 217 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 CSH2P0DML3 217 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 CDH1P12830 882 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 UGT1A1P22309 533 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 HOXA13P31271 388 aaPredicted RBP3.25□□□□□ -1.89
TARDBP-208ENST00000477447 IL15P40933 162 aaPredicted RBP3.25□□□□□ -1.89
TARDBP-208ENST00000477447 SLC15A1P46059 708 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 AMPHP49418 695 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 ACVR2BQ13705 512 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TMEM35AQ53FP2 167 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 KRTCAP3Q53RY4 240 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 RAB41Q5JT25 222 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 PLEKHS1Q5SXH7 462 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 RARS2Q5T160 578 aaKnown RBP3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TRNP1Q6NT89 227 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 RAD9BQ6WBX8 426 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TUBA1AQ71U36 451 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 SLC9B2Q86UD5 537 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TMPRSS12Q86WS5 348 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 KMT5CQ86Y97 462 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 ARID3BQ8IVW6 561 aaPredicted RBP3.25□□□□□ -1.89
TARDBP-208ENST00000477447 PM20D2Q8IYS1 436 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 SCYL3Q8IZE3 742 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TMTC2Q8N394 836 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 RASGEF1CQ8N431 466 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 EMC1Q8N766 993 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 GSDMBQ8TAX9 411 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 PPP4R1Q8TF05 950 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 SORCS1Q8WY21 1168 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TUBA1CQ9BQE3 449 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 C1QTNF1Q9BXJ1 281 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TMEM39BQ9GZU3 492 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 HRH4Q9H3N8 390 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 DNAJC18Q9H819 358 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 UBTD1Q9HAC8 227 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 PLSCR4Q9NRQ2 329 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 TMEM30AQ9NV96 361 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 PAG1Q9NWQ8 432 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 NSMCE4AQ9NXX6 385 aa3.25□□□□□ -1.89
TARDBP-208ENST00000477447 DBNLQ9UJU6 430 aaKnown RBP3.25□□□□□ -1.89
TARDBP-208ENST00000477447 RALYQ9UKM9 306 aaKnown RBP3.25□□□□□ -1.89
TARDBP-208ENST00000477447 CGNL1Q0VF96 1302 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 LILRA5A6NI73 299 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 CTDSP2O14595 271 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 AHCYL1O43865 530 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 MITFO75030 526 aaPredicted RBP3.24□□□□□ -1.89
TARDBP-208ENST00000477447 CAMTA2O94983 1202 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 TUBBP07437 444 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 PORP16435 677 aaPredicted RBP3.24□□□□□ -1.89
TARDBP-208ENST00000477447 FUT6P51993 359 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 ERVFC1-1P60608 527 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 RPL36AP83881 106 aaKnown RBP3.24□□□□□ -1.89
TARDBP-208ENST00000477447 PLIN5Q00G26 463 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 SPOCK1Q08629 439 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 GTF2H2Q13888 395 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 KCNC3Q14003 757 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 ZNF234Q14588 700 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 STXBP5Q5T5C0 1151 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 OR7E24Q6IFN5 339 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 LCN10Q6JVE6 187 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 GTF2H2CQ6P1K8 395 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 ASB18Q6ZVZ8 466 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 ATG9AQ7Z3C6 839 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 PCGF5Q86SE9 256 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 EPHX4Q8IUS5 362 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.24□□□□□ -1.895e-8■■■■■ 204.6
TARDBP-208ENST00000477447 TAGAPQ8N103 731 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 NAGSQ8N159 534 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 IL17RCQ8NAC3 791 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 POC1AQ8NBT0 407 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 LNX1Q8TBB1 728 aaPredicted RBP3.24□□□□□ -1.89
TARDBP-208ENST00000477447 NAF1Q96HR8 494 aaKnown RBP3.24□□□□□ -1.89
TARDBP-208ENST00000477447 LMLNQ96KR4 655 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 TTC14Q96N46 770 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 DDOQ99489 341 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 SYT17Q9BSW7 474 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 RAD21L1Q9H4I0 556 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 EVA1AQ9H8M9 152 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 WWOXQ9NZC7 414 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 SUCLA2Q9P2R7 463 aaPredicted RBP3.24□□□□□ -1.89
TARDBP-208ENST00000477447 POU2F3Q9UKI9 436 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 PCDHGB4Q9UN71 923 aa3.24□□□□□ -1.89
TARDBP-208ENST00000477447 DLGAP4Q9Y2H0 992 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms