RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TOP6BLQ8N6T0 577 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 BEND7Q8N7W2 519 aaPredicted RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 OR13J1Q8NGT2 312 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 FRS2Q8WU20 508 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 EDEM1Q92611 657 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 SDCCAG3Q96C92 435 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 ADNPQ9H2P0 1102 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 CSNK1G1Q9HCP0 422 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 ABCB10Q9NRK6 738 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PLSCR3Q9NRY6 295 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TMLHEQ9NVH6 421 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 OSER1Q9NX31 292 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 BFARQ9NZS9 450 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 POLG2Q9UHN1 485 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PTGDR2Q9Y5Y4 395 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 ZFC3H1O60293 1989 aaKnown RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 A8MT66 165 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 FXYD1O00168 92 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 STK25O00506 426 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 DDHD2O94830 711 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 INMTO95050 263 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 MMP2P08253 660 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 HTR1AP08908 422 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PPP1R8Q12972 351 aaKnown RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 PRPSAP1Q14558 356 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 SNX17Q15036 470 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 INTS6LQ5JSJ4 861 aaKnown RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 GTF2IRD2BQ6EKJ0 949 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 CRTC3Q6UUV7 619 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TMC5Q6UXY8 1006 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 RANBP10Q6VN20 620 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PLEKHG7Q6ZR37 379 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 SLCO6A1Q86UG4 719 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 GTF2IRD2Q86UP8 949 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TAC4Q86UU9 113 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TMEM151BQ8IW70 566 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 SHCBP1Q8NEM2 672 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 OR7G1Q8NGA0 311 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PSMA8Q8TAA3 256 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 GIPC2Q8TF65 315 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 ZUFSPQ96AP4 578 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 C8orf48Q96LL4 319 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 UQCC2Q9BRT2 126 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 FAM49AQ9H0Q0 323 aaPredicted RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 TLR9Q9NR96 1032 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 OR12D3Q9UGF7 316 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 CDYLQ9Y232 598 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 LOC105371267A0A1B0GV96 52 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 FAM95CA0A1B0GW59 222 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 MAGEB16A2A368 324 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TAF4O00268 1085 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 HLA-DQB2P05538 268 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 SMIM10L2AP0DMW4 78 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 SMIM10L2BP0DMW5 78 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PRKCAP17252 672 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TAF6P49848 677 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 AIF1P55008 147 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 CDH17Q12864 832 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PPIL2Q13356 520 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 POU6F1Q14863 301 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TAF1CQ15572 869 aaPredicted RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 SNAP47Q5SQN1 464 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 NOTUMQ6P988 496 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 ABRAXAS1Q6UWZ7 409 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 MFSD4AQ8N468 514 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 ATP6V0D2Q8N8Y2 350 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 ANKFN1Q8N957 763 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 DNAAF3Q8N9W5 541 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 FIG4Q92562 907 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 FKBP10Q96AY3 582 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 C1orf74Q96LT6 269 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TKTL2Q9H0I9 626 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PNMA8BQ9ULN7 279 aaPredicted RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 GINS2Q9Y248 185 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 CAB39Q9Y376 341 aaPredicted RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 LAMA2P24043 3122 aaKnown RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 TDRD15B5MCY1 1934 aaKnown RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 ASPDHA6ND91 283 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ZSCAN5BA6NJL1 495 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ASB14A6NK59 587 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 MEN1O00255 615 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 GJB3O75712 270 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CDH1P12830 882 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 AGXTP21549 392 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 DNAJB1P25685 340 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 HOXC8P31273 242 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CDKN2DP55273 166 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 TPI1P60174 286 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 PHC1P78364 1004 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 USP10Q14694 798 aaKnown RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 DUSP28Q4G0W2 176 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 WDR45BQ5MNZ6 344 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 DHFR2Q86XF0 187 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 DTX3Q8N9I9 347 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 TP53I13Q8NBR0 393 aaPredicted RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 GALNT6Q8NCL4 622 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 HDAC10Q969S8 669 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ITCHQ96J02 903 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 C17orf80Q9BSJ5 609 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms